Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDCD6O75340 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PDCD6O75340 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDCD6O75340 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDCD6O75340 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
PDCD6O75340 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDCD6O75340 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDCD6O75340 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.13■□□□□ 0.33
PDCD6O75340 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDCD6O75340 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDCD6O75340 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDCD6O75340 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.13■□□□□ 0.33
PDCD6O75340 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDCD6O75340 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDCD6O75340 AC091799.1-201ENST00000422823 811 ntBASIC17.13■□□□□ 0.33
PDCD6O75340 AC007322.3-201ENST00000426526 701 ntBASIC17.13■□□□□ 0.33
PDCD6O75340 YBX1P1-201ENST00000445822 960 ntBASIC17.13■□□□□ 0.33
PDCD6O75340 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.13■□□□□ 0.33
PDCD6O75340 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDCD6O75340 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDCD6O75340 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDCD6O75340 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDCD6O75340 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.13■□□□□ 0.33
PDCD6O75340 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PDCD6O75340 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.13■□□□□ 0.33
PDCD6O75340 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDCD6O75340 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDCD6O75340 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDCD6O75340 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDCD6O75340 RBM17P2-201ENST00000616397 1405 ntBASIC17.13■□□□□ 0.33
PDCD6O75340 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDCD6O75340 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PDCD6O75340 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDCD6O75340 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDCD6O75340 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDCD6O75340 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PDCD6O75340 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDCD6O75340 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDCD6O75340 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.12■□□□□ 0.33
PDCD6O75340 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDCD6O75340 AC007952.6-201ENST00000573168 2673 ntBASIC17.12■□□□□ 0.33
PDCD6O75340 AC003957.1-201ENST00000625108 2673 ntBASIC17.12■□□□□ 0.33
PDCD6O75340 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.12■□□□□ 0.33
PDCD6O75340 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDCD6O75340 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.12■□□□□ 0.33
PDCD6O75340 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDCD6O75340 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.12■□□□□ 0.33
PDCD6O75340 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.12■□□□□ 0.33
PDCD6O75340 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.12■□□□□ 0.33
PDCD6O75340 SLC7A5P1-201ENST00000568957 537 ntBASIC17.12■□□□□ 0.33
PDCD6O75340 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.12■□□□□ 0.33
PDCD6O75340 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PDCD6O75340 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.12■□□□□ 0.33
PDCD6O75340 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDCD6O75340 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.12■□□□□ 0.33
PDCD6O75340 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PDCD6O75340 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDCD6O75340 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDCD6O75340 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.12■□□□□ 0.33
PDCD6O75340 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDCD6O75340 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDCD6O75340 KRT8P36-201ENST00000489121 1440 ntBASIC17.12■□□□□ 0.33
PDCD6O75340 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PDCD6O75340 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDCD6O75340 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDCD6O75340 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDCD6O75340 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDCD6O75340 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.11■□□□□ 0.33
PDCD6O75340 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PDCD6O75340 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDCD6O75340 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDCD6O75340 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.11■□□□□ 0.33
PDCD6O75340 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDCD6O75340 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDCD6O75340 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PDCD6O75340 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDCD6O75340 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDCD6O75340 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDCD6O75340 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.11■□□□□ 0.33
PDCD6O75340 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.11■□□□□ 0.33
PDCD6O75340 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDCD6O75340 FAM21FP-204ENST00000608637 956 ntBASIC17.11■□□□□ 0.33
PDCD6O75340 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDCD6O75340 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDCD6O75340 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDCD6O75340 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.11■□□□□ 0.33
PDCD6O75340 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDCD6O75340 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDCD6O75340 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
PDCD6O75340 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDCD6O75340 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDCD6O75340 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PDCD6O75340 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.1■□□□□ 0.33
PDCD6O75340 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDCD6O75340 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.1■□□□□ 0.33
PDCD6O75340 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDCD6O75340 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.1■□□□□ 0.33
PDCD6O75340 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.1■□□□□ 0.33
PDCD6O75340 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDCD6O75340 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms