Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH16O75309 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH16O75309 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.49■□□□□ 0.87
CDH16O75309 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH16O75309 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH16O75309 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.49■□□□□ 0.87
CDH16O75309 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH16O75309 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.49■□□□□ 0.87
CDH16O75309 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH16O75309 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH16O75309 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH16O75309 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH16O75309 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH16O75309 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH16O75309 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH16O75309 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH16O75309 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH16O75309 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH16O75309 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
CDH16O75309 UNC93B3-201ENST00000308076 687 ntBASIC20.48■□□□□ 0.87
CDH16O75309 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.48■□□□□ 0.87
CDH16O75309 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.48■□□□□ 0.87
CDH16O75309 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.48■□□□□ 0.87
CDH16O75309 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.48■□□□□ 0.87
CDH16O75309 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH16O75309 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.48■□□□□ 0.87
CDH16O75309 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CDH16O75309 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH16O75309 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CDH16O75309 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CDH16O75309 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH16O75309 AP000974.1-201ENST00000623909 2387 ntBASIC20.48■□□□□ 0.87
CDH16O75309 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
CDH16O75309 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.47■□□□□ 0.87
CDH16O75309 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH16O75309 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH16O75309 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH16O75309 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.47■□□□□ 0.87
CDH16O75309 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CDH16O75309 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.47■□□□□ 0.87
CDH16O75309 TMEM179-206ENST00000616017 1645 ntBASIC20.47■□□□□ 0.87
CDH16O75309 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.47■□□□□ 0.87
CDH16O75309 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CDH16O75309 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH16O75309 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH16O75309 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH16O75309 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.47■□□□□ 0.87
CDH16O75309 TSPY26P-201ENST00000476365 1326 ntBASIC20.47■□□□□ 0.87
CDH16O75309 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CDH16O75309 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH16O75309 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.46■□□□□ 0.87
CDH16O75309 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH16O75309 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH16O75309 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.46■□□□□ 0.87
CDH16O75309 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH16O75309 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH16O75309 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH16O75309 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH16O75309 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH16O75309 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH16O75309 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CDH16O75309 AC245052.3-201ENST00000450182 901 ntBASIC20.46■□□□□ 0.87
CDH16O75309 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH16O75309 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH16O75309 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.46■□□□□ 0.87
CDH16O75309 AL136162.1-201ENST00000607711 1078 ntBASIC20.46■□□□□ 0.87
CDH16O75309 AC106739.1-201ENST00000617035 715 ntBASIC20.46■□□□□ 0.87
CDH16O75309 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CDH16O75309 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH16O75309 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH16O75309 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CDH16O75309 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH16O75309 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH16O75309 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH16O75309 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.46■□□□□ 0.87
CDH16O75309 AC135279.3-201ENST00000610945 1311 ntBASIC20.46■□□□□ 0.87
CDH16O75309 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH16O75309 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH16O75309 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH16O75309 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CDH16O75309 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH16O75309 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH16O75309 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH16O75309 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
CDH16O75309 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDH16O75309 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CDH16O75309 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH16O75309 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH16O75309 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.45■□□□□ 0.86
CDH16O75309 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH16O75309 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH16O75309 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.45■□□□□ 0.86
CDH16O75309 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH16O75309 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH16O75309 AC024257.2-201ENST00000549699 147 ntBASIC20.45■□□□□ 0.86
CDH16O75309 AC110285.6-201ENST00000617652 491 ntBASIC20.45■□□□□ 0.86
CDH16O75309 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDH16O75309 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.45■□□□□ 0.86
CDH16O75309 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDH16O75309 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms