Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT3O75175 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CNOT3O75175 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT3O75175 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT3O75175 RARRES2P4-201ENST00000514074 484 ntBASIC19.62■□□□□ 0.73
CNOT3O75175 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.62■□□□□ 0.73
CNOT3O75175 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.62■□□□□ 0.73
CNOT3O75175 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT3O75175 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.62■□□□□ 0.73
CNOT3O75175 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT3O75175 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT3O75175 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNOT3O75175 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.61■□□□□ 0.73
CNOT3O75175 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.61■□□□□ 0.73
CNOT3O75175 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT3O75175 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CNOT3O75175 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT3O75175 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT3O75175 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT3O75175 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT3O75175 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT3O75175 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.61■□□□□ 0.73
CNOT3O75175 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
CNOT3O75175 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.61■□□□□ 0.73
CNOT3O75175 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT3O75175 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT3O75175 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT3O75175 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNOT3O75175 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CNOT3O75175 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.61■□□□□ 0.73
CNOT3O75175 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNOT3O75175 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNOT3O75175 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.6■□□□□ 0.73
CNOT3O75175 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.6■□□□□ 0.73
CNOT3O75175 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.6■□□□□ 0.73
CNOT3O75175 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.6■□□□□ 0.73
CNOT3O75175 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.6■□□□□ 0.73
CNOT3O75175 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
CNOT3O75175 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.6■□□□□ 0.73
CNOT3O75175 LINC01521-201ENST00000504184 1943 ntBASIC19.6■□□□□ 0.73
CNOT3O75175 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.6■□□□□ 0.73
CNOT3O75175 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNOT3O75175 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.6■□□□□ 0.73
CNOT3O75175 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.6■□□□□ 0.73
CNOT3O75175 AC010980.2-201ENST00000587099 1412 ntBASIC19.59■□□□□ 0.73
CNOT3O75175 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT3O75175 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT3O75175 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT3O75175 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT3O75175 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CNOT3O75175 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT3O75175 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CNOT3O75175 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT3O75175 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CNOT3O75175 BX276092.2-201ENST00000417668 665 ntBASIC19.59■□□□□ 0.73
CNOT3O75175 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.59■□□□□ 0.73
CNOT3O75175 MIR4758-201ENST00000577688 71 ntBASIC19.59■□□□□ 0.73
CNOT3O75175 MIR4651-201ENST00000582622 73 ntBASIC19.59■□□□□ 0.73
CNOT3O75175 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CNOT3O75175 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.59■□□□□ 0.73
CNOT3O75175 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CNOT3O75175 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.59■□□□□ 0.73
CNOT3O75175 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.59■□□□□ 0.73
CNOT3O75175 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT3O75175 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.59■□□□□ 0.73
CNOT3O75175 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CNOT3O75175 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CNOT3O75175 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CNOT3O75175 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNOT3O75175 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNOT3O75175 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CNOT3O75175 TSPY20P-201ENST00000450910 630 ntBASIC19.58■□□□□ 0.72
CNOT3O75175 AC092118.2-201ENST00000613495 667 ntBASIC19.58■□□□□ 0.72
CNOT3O75175 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CNOT3O75175 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNOT3O75175 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CNOT3O75175 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNOT3O75175 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNOT3O75175 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CNOT3O75175 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CNOT3O75175 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.58■□□□□ 0.72
CNOT3O75175 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNOT3O75175 Z98882.1-201ENST00000622160 2253 ntBASIC19.58■□□□□ 0.72
CNOT3O75175 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CNOT3O75175 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CNOT3O75175 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNOT3O75175 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT3O75175 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT3O75175 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT3O75175 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CNOT3O75175 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT3O75175 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.57■□□□□ 0.72
CNOT3O75175 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT3O75175 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
CNOT3O75175 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT3O75175 AC245052.3-201ENST00000450182 901 ntBASIC19.57■□□□□ 0.72
CNOT3O75175 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.57■□□□□ 0.72
CNOT3O75175 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT3O75175 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT3O75175 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms