Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.52■□□□□ 0.72
SLC28A2O43868 KRT18P20-201ENST00000548986 1279 ntBASIC19.52■□□□□ 0.72
SLC28A2O43868 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.52■□□□□ 0.72
SLC28A2O43868 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
SLC28A2O43868 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC28A2O43868 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC28A2O43868 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC28A2O43868 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC28A2O43868 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.52■□□□□ 0.71
SLC28A2O43868 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.52■□□□□ 0.71
SLC28A2O43868 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
SLC28A2O43868 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SLC28A2O43868 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A2O43868 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A2O43868 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A2O43868 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A2O43868 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A2O43868 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A2O43868 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A2O43868 AL512625.2-201ENST00000417533 625 ntBASIC19.51■□□□□ 0.71
SLC28A2O43868 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.51■□□□□ 0.71
SLC28A2O43868 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SLC28A2O43868 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A2O43868 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SLC28A2O43868 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A2O43868 AP003097.1-201ENST00000530657 1135 ntBASIC19.51■□□□□ 0.71
SLC28A2O43868 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC28A2O43868 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A2O43868 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A2O43868 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A2O43868 AL359736.2-201ENST00000621992 437 ntBASIC19.51■□□□□ 0.71
SLC28A2O43868 FAM197Y4-202ENST00000622692 608 ntBASIC19.51■□□□□ 0.71
SLC28A2O43868 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC28A2O43868 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A2O43868 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A2O43868 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC28A2O43868 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC28A2O43868 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A2O43868 AL157384.1-201ENST00000445995 2473 ntBASIC19.51■□□□□ 0.71
SLC28A2O43868 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A2O43868 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
SLC28A2O43868 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A2O43868 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.51■□□□□ 0.71
SLC28A2O43868 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A2O43868 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A2O43868 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC28A2O43868 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC28A2O43868 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SLC28A2O43868 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC28A2O43868 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.5■□□□□ 0.71
SLC28A2O43868 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SLC28A2O43868 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC28A2O43868 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.5■□□□□ 0.71
SLC28A2O43868 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC28A2O43868 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC28A2O43868 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC28A2O43868 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SLC28A2O43868 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC28A2O43868 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC28A2O43868 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC28A2O43868 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
SLC28A2O43868 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC28A2O43868 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
SLC28A2O43868 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SLC28A2O43868 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
SLC28A2O43868 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC28A2O43868 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC28A2O43868 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC28A2O43868 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC28A2O43868 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC28A2O43868 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC28A2O43868 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC28A2O43868 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC28A2O43868 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SLC28A2O43868 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SLC28A2O43868 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.49■□□□□ 0.71
SLC28A2O43868 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC28A2O43868 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC28A2O43868 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC28A2O43868 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SLC28A2O43868 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC28A2O43868 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC28A2O43868 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC28A2O43868 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC28A2O43868 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC28A2O43868 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC28A2O43868 AC010141.2-201ENST00000452426 721 ntBASIC19.49■□□□□ 0.71
SLC28A2O43868 AC091874.3-201ENST00000512672 1195 ntBASIC19.49■□□□□ 0.71
SLC28A2O43868 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC28A2O43868 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SLC28A2O43868 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.49■□□□□ 0.71
SLC28A2O43868 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SLC28A2O43868 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC28A2O43868 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC28A2O43868 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC28A2O43868 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC28A2O43868 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC28A2O43868 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SLC28A2O43868 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SLC28A2O43868 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms