Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF9O43307 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF9O43307 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF9O43307 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.72■□□□□ 0.59
ARHGEF9O43307 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
ARHGEF9O43307 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.72■□□□□ 0.59
ARHGEF9O43307 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.72■□□□□ 0.59
ARHGEF9O43307 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF9O43307 CDCA4P2-201ENST00000441182 718 ntBASIC18.72■□□□□ 0.59
ARHGEF9O43307 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.72■□□□□ 0.59
ARHGEF9O43307 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.72■□□□□ 0.59
ARHGEF9O43307 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.72■□□□□ 0.59
ARHGEF9O43307 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.72■□□□□ 0.59
ARHGEF9O43307 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.72■□□□□ 0.59
ARHGEF9O43307 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF9O43307 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF9O43307 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF9O43307 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF9O43307 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.72■□□□□ 0.59
ARHGEF9O43307 AIRN-201ENST00000601203 4374 ntBASIC18.72■□□□□ 0.59
ARHGEF9O43307 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
ARHGEF9O43307 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF9O43307 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF9O43307 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF9O43307 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ARHGEF9O43307 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.71■□□□□ 0.59
ARHGEF9O43307 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF9O43307 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ARHGEF9O43307 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.71■□□□□ 0.59
ARHGEF9O43307 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.71■□□□□ 0.59
ARHGEF9O43307 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.71■□□□□ 0.59
ARHGEF9O43307 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.71■□□□□ 0.59
ARHGEF9O43307 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF9O43307 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.71■□□□□ 0.59
ARHGEF9O43307 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.71■□□□□ 0.59
ARHGEF9O43307 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.71■□□□□ 0.59
ARHGEF9O43307 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.71■□□□□ 0.59
ARHGEF9O43307 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF9O43307 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.71■□□□□ 0.59
ARHGEF9O43307 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.71■□□□□ 0.59
ARHGEF9O43307 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF9O43307 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF9O43307 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
ARHGEF9O43307 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
ARHGEF9O43307 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF9O43307 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ARHGEF9O43307 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF9O43307 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF9O43307 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF9O43307 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.7■□□□□ 0.58
ARHGEF9O43307 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ARHGEF9O43307 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ARHGEF9O43307 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF9O43307 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.7■□□□□ 0.58
ARHGEF9O43307 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF9O43307 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.7■□□□□ 0.58
ARHGEF9O43307 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF9O43307 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.7■□□□□ 0.58
ARHGEF9O43307 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.7■□□□□ 0.58
ARHGEF9O43307 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF9O43307 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.7■□□□□ 0.58
ARHGEF9O43307 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ARHGEF9O43307 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.7■□□□□ 0.58
ARHGEF9O43307 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF9O43307 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.7■□□□□ 0.58
ARHGEF9O43307 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF9O43307 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.7■□□□□ 0.58
ARHGEF9O43307 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.7■□□□□ 0.58
ARHGEF9O43307 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
ARHGEF9O43307 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF9O43307 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF9O43307 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.69■□□□□ 0.58
ARHGEF9O43307 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF9O43307 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ARHGEF9O43307 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ARHGEF9O43307 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF9O43307 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF9O43307 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.69■□□□□ 0.58
ARHGEF9O43307 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF9O43307 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF9O43307 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF9O43307 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF9O43307 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.69■□□□□ 0.58
ARHGEF9O43307 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.69■□□□□ 0.58
ARHGEF9O43307 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF9O43307 KRT19P1-201ENST00000405746 1186 ntBASIC18.69■□□□□ 0.58
ARHGEF9O43307 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.69■□□□□ 0.58
ARHGEF9O43307 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF9O43307 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.69■□□□□ 0.58
ARHGEF9O43307 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF9O43307 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.69■□□□□ 0.58
ARHGEF9O43307 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.69■□□□□ 0.58
ARHGEF9O43307 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.69■□□□□ 0.58
ARHGEF9O43307 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF9O43307 AC104771.1-201ENST00000603335 964 ntBASIC18.69■□□□□ 0.58
ARHGEF9O43307 RAP2CP1-201ENST00000605103 478 ntBASIC18.69■□□□□ 0.58
ARHGEF9O43307 AL109923.1-201ENST00000618799 583 ntBASIC18.69■□□□□ 0.58
ARHGEF9O43307 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF9O43307 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF9O43307 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms