Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CCDC188H7C350 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC188H7C350 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC188H7C350 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC188H7C350 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
CCDC188H7C350 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC188H7C350 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC188H7C350 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC188H7C350 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC188H7C350 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC188H7C350 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC188H7C350 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC188H7C350 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC188H7C350 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC188H7C350 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC188H7C350 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC188H7C350 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC188H7C350 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.1■□□□□ 0.97
CCDC188H7C350 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC188H7C350 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC188H7C350 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CCDC188H7C350 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC188H7C350 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC188H7C350 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC188H7C350 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC188H7C350 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC188H7C350 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CCDC188H7C350 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC188H7C350 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC188H7C350 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC188H7C350 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC188H7C350 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC188H7C350 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC188H7C350 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC188H7C350 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CCDC188H7C350 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC188H7C350 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CCDC188H7C350 AP001330.3-201ENST00000520123 633 ntBASIC21.09■□□□□ 0.97
CCDC188H7C350 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC188H7C350 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
CCDC188H7C350 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC188H7C350 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC188H7C350 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC188H7C350 AC098818.2-201ENST00000564925 2320 ntBASIC21.09■□□□□ 0.97
CCDC188H7C350 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC188H7C350 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC188H7C350 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC188H7C350 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
CCDC188H7C350 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CCDC188H7C350 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC188H7C350 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC188H7C350 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC188H7C350 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC188H7C350 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.08■□□□□ 0.97
CCDC188H7C350 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC188H7C350 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC188H7C350 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.08■□□□□ 0.96
CCDC188H7C350 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC188H7C350 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
CCDC188H7C350 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.08■□□□□ 0.96
CCDC188H7C350 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC188H7C350 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CCDC188H7C350 RASA4CP-201ENST00000424092 1398 ntBASIC21.08■□□□□ 0.96
CCDC188H7C350 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC188H7C350 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC188H7C350 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CCDC188H7C350 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC188H7C350 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC188H7C350 EDA-201ENST00000338901 1233 ntBASIC21.07■□□□□ 0.96
CCDC188H7C350 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.07■□□□□ 0.96
CCDC188H7C350 AC079140.4-201ENST00000507448 529 ntBASIC21.07■□□□□ 0.96
CCDC188H7C350 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC188H7C350 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC188H7C350 AL354811.1-201ENST00000610286 706 ntBASIC21.07■□□□□ 0.96
CCDC188H7C350 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC188H7C350 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC188H7C350 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC188H7C350 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC188H7C350 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC188H7C350 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC188H7C350 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC188H7C350 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC188H7C350 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC188H7C350 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC188H7C350 KRT8P36-201ENST00000489121 1440 ntBASIC21.06■□□□□ 0.96
CCDC188H7C350 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC188H7C350 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC188H7C350 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC188H7C350 AL691432.2-201ENST00000607222 2038 ntBASIC21.06■□□□□ 0.96
CCDC188H7C350 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC188H7C350 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC188H7C350 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC188H7C350 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC188H7C350 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC188H7C350 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.06■□□□□ 0.96
CCDC188H7C350 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.06■□□□□ 0.96
CCDC188H7C350 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC188H7C350 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC188H7C350 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC188H7C350 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms