Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 HCG11-201ENST00000411553 5696 ntBASIC14.84□□□□□ -0.03
SMKR1H3BMG3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SMKR1H3BMG3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
SMKR1H3BMG3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SMKR1H3BMG3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SMKR1H3BMG3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SMKR1H3BMG3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
SMKR1H3BMG3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMKR1H3BMG3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMKR1H3BMG3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC14.83□□□□□ -0.04
SMKR1H3BMG3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SMKR1H3BMG3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC14.83□□□□□ -0.04
SMKR1H3BMG3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.83□□□□□ -0.04
SMKR1H3BMG3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMKR1H3BMG3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMKR1H3BMG3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMKR1H3BMG3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SMKR1H3BMG3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMKR1H3BMG3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMKR1H3BMG3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
SMKR1H3BMG3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMKR1H3BMG3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 AC011484.1-201ENST00000377652 1995 ntBASIC14.82□□□□□ -0.04
SMKR1H3BMG3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.82□□□□□ -0.04
SMKR1H3BMG3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMKR1H3BMG3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMKR1H3BMG3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMKR1H3BMG3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMKR1H3BMG3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.8□□□□□ -0.04
SMKR1H3BMG3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMKR1H3BMG3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SMKR1H3BMG3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMKR1H3BMG3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMKR1H3BMG3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMKR1H3BMG3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMKR1H3BMG3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMKR1H3BMG3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SMKR1H3BMG3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC14.8□□□□□ -0.04
SMKR1H3BMG3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.8□□□□□ -0.04
SMKR1H3BMG3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC14.8□□□□□ -0.04
SMKR1H3BMG3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMKR1H3BMG3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMKR1H3BMG3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMKR1H3BMG3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms