Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AL355355.2-201ENST00000442321 338 ntBASIC16.91■□□□□ 0.3
RNF223E7ERA6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RNF223E7ERA6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.91■□□□□ 0.3
RNF223E7ERA6 AP003071.4-201ENST00000562276 1284 ntBASIC16.91■□□□□ 0.3
RNF223E7ERA6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF223E7ERA6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF223E7ERA6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF223E7ERA6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF223E7ERA6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RNF223E7ERA6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF223E7ERA6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
RNF223E7ERA6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
RNF223E7ERA6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RNF223E7ERA6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF223E7ERA6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF223E7ERA6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF223E7ERA6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RNF223E7ERA6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RNF223E7ERA6 AC017007.3-201ENST00000479865 435 ntBASIC16.9■□□□□ 0.3
RNF223E7ERA6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF223E7ERA6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF223E7ERA6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF223E7ERA6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF223E7ERA6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF223E7ERA6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
RNF223E7ERA6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF223E7ERA6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RNF223E7ERA6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF223E7ERA6 AL445228.2-201ENST00000605589 952 ntBASIC16.9■□□□□ 0.3
RNF223E7ERA6 CD177P1-201ENST00000606252 935 ntBASIC16.9■□□□□ 0.3
RNF223E7ERA6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RNF223E7ERA6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.9■□□□□ 0.3
RNF223E7ERA6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RNF223E7ERA6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF223E7ERA6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF223E7ERA6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF223E7ERA6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF223E7ERA6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RNF223E7ERA6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
RNF223E7ERA6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RNF223E7ERA6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF223E7ERA6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF223E7ERA6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF223E7ERA6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF223E7ERA6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF223E7ERA6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF223E7ERA6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF223E7ERA6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF223E7ERA6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF223E7ERA6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF223E7ERA6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF223E7ERA6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF223E7ERA6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF223E7ERA6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF223E7ERA6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF223E7ERA6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF223E7ERA6 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.89■□□□□ 0.29
RNF223E7ERA6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF223E7ERA6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF223E7ERA6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF223E7ERA6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
RNF223E7ERA6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF223E7ERA6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF223E7ERA6 RN7SL850P-201ENST00000579959 291 ntBASIC16.89■□□□□ 0.29
RNF223E7ERA6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF223E7ERA6 AL353708.3-201ENST00000610272 989 ntBASIC16.89■□□□□ 0.29
RNF223E7ERA6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF223E7ERA6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF223E7ERA6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF223E7ERA6 C9orf163-202ENST00000624034 2573 ntBASIC16.89■□□□□ 0.29
RNF223E7ERA6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RNF223E7ERA6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF223E7ERA6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF223E7ERA6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF223E7ERA6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF223E7ERA6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF223E7ERA6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF223E7ERA6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF223E7ERA6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF223E7ERA6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF223E7ERA6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF223E7ERA6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF223E7ERA6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF223E7ERA6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
RNF223E7ERA6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF223E7ERA6 MMP23A-201ENST00000234610 1017 ntBASIC16.88■□□□□ 0.29
RNF223E7ERA6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF223E7ERA6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF223E7ERA6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF223E7ERA6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF223E7ERA6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF223E7ERA6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF223E7ERA6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RNF223E7ERA6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF223E7ERA6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.88■□□□□ 0.29
RNF223E7ERA6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF223E7ERA6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF223E7ERA6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF223E7ERA6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF223E7ERA6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms