Protein–RNA interactions for Protein: A6NLE4

SMIM23, Small integral membrane protein 23, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23A6NLE4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM23A6NLE4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SMIM23A6NLE4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM23A6NLE4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 AL035685.1-201ENST00000636663 812 ntBASIC20.75■□□□□ 0.91
SMIM23A6NLE4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM23A6NLE4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.74■□□□□ 0.91
SMIM23A6NLE4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 AC061975.6-201ENST00000579045 1553 ntBASIC20.74■□□□□ 0.91
SMIM23A6NLE4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM23A6NLE4 AC005224.4-201ENST00000583262 1652 ntBASIC20.73■□□□□ 0.91
SMIM23A6NLE4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 AP000974.1-201ENST00000623909 2387 ntBASIC20.73■□□□□ 0.91
SMIM23A6NLE4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SMIM23A6NLE4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM23A6NLE4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM23A6NLE4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM23A6NLE4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM23A6NLE4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM23A6NLE4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.72■□□□□ 0.91
SMIM23A6NLE4 AC133561.4-201ENST00000566112 224 ntBASIC20.72■□□□□ 0.91
SMIM23A6NLE4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM23A6NLE4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM23A6NLE4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SMIM23A6NLE4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SMIM23A6NLE4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.72■□□□□ 0.91
SMIM23A6NLE4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.72■□□□□ 0.91
SMIM23A6NLE4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM23A6NLE4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SMIM23A6NLE4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM23A6NLE4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.71■□□□□ 0.91
SMIM23A6NLE4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms