Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRABD2BA6NFA1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRABD2BA6NFA1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRABD2BA6NFA1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRABD2BA6NFA1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
TRABD2BA6NFA1 AC242852.2-201ENST00000615738 1807 ntBASIC19.56■□□□□ 0.72
TRABD2BA6NFA1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRABD2BA6NFA1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRABD2BA6NFA1 MMP23A-201ENST00000234610 1017 ntBASIC19.56■□□□□ 0.72
TRABD2BA6NFA1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRABD2BA6NFA1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.56■□□□□ 0.72
TRABD2BA6NFA1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
TRABD2BA6NFA1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRABD2BA6NFA1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRABD2BA6NFA1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRABD2BA6NFA1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.56■□□□□ 0.72
TRABD2BA6NFA1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TRABD2BA6NFA1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.56■□□□□ 0.72
TRABD2BA6NFA1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.56■□□□□ 0.72
TRABD2BA6NFA1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRABD2BA6NFA1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.56■□□□□ 0.72
TRABD2BA6NFA1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRABD2BA6NFA1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.55■□□□□ 0.72
TRABD2BA6NFA1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRABD2BA6NFA1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRABD2BA6NFA1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRABD2BA6NFA1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRABD2BA6NFA1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRABD2BA6NFA1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRABD2BA6NFA1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRABD2BA6NFA1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
TRABD2BA6NFA1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRABD2BA6NFA1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.55■□□□□ 0.72
TRABD2BA6NFA1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.55■□□□□ 0.72
TRABD2BA6NFA1 AC026471.5-201ENST00000615068 467 ntBASIC19.55■□□□□ 0.72
TRABD2BA6NFA1 AC006557.6-201ENST00000623071 864 ntBASIC19.55■□□□□ 0.72
TRABD2BA6NFA1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRABD2BA6NFA1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRABD2BA6NFA1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRABD2BA6NFA1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 C11orf96-202ENST00000528572 1834 ntBASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 AL137060.1-201ENST00000618151 2648 ntBASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 AP003071.4-201ENST00000562276 1284 ntBASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 AC092865.7-201ENST00000641832 219 ntBASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.54■□□□□ 0.72
TRABD2BA6NFA1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
TRABD2BA6NFA1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRABD2BA6NFA1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.53■□□□□ 0.72
TRABD2BA6NFA1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRABD2BA6NFA1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRABD2BA6NFA1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRABD2BA6NFA1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRABD2BA6NFA1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRABD2BA6NFA1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRABD2BA6NFA1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRABD2BA6NFA1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TRABD2BA6NFA1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.53■□□□□ 0.72
TRABD2BA6NFA1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.53■□□□□ 0.72
TRABD2BA6NFA1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRABD2BA6NFA1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRABD2BA6NFA1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
TRABD2BA6NFA1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRABD2BA6NFA1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRABD2BA6NFA1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.53■□□□□ 0.72
TRABD2BA6NFA1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRABD2BA6NFA1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRABD2BA6NFA1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
TRABD2BA6NFA1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRABD2BA6NFA1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRABD2BA6NFA1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TRABD2BA6NFA1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TRABD2BA6NFA1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRABD2BA6NFA1 AL355355.2-201ENST00000442321 338 ntBASIC19.52■□□□□ 0.72
TRABD2BA6NFA1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
TRABD2BA6NFA1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.52■□□□□ 0.72
TRABD2BA6NFA1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.52■□□□□ 0.72
TRABD2BA6NFA1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.52■□□□□ 0.72
TRABD2BA6NFA1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TRABD2BA6NFA1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.52■□□□□ 0.72
TRABD2BA6NFA1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRABD2BA6NFA1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRABD2BA6NFA1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms