Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHISA3A0PJX4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SHISA3A0PJX4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHISA3A0PJX4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SHISA3A0PJX4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHISA3A0PJX4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SHISA3A0PJX4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHISA3A0PJX4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHISA3A0PJX4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SHISA3A0PJX4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHISA3A0PJX4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHISA3A0PJX4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
SHISA3A0PJX4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
SHISA3A0PJX4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.72■□□□□ 0.43
SHISA3A0PJX4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHISA3A0PJX4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHISA3A0PJX4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.72■□□□□ 0.43
SHISA3A0PJX4 AC053503.5-201ENST00000601508 636 ntBASIC17.72■□□□□ 0.43
SHISA3A0PJX4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.72■□□□□ 0.43
SHISA3A0PJX4 RARRES2P11-201ENST00000635158 484 ntBASIC17.72■□□□□ 0.43
SHISA3A0PJX4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHISA3A0PJX4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHISA3A0PJX4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHISA3A0PJX4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SHISA3A0PJX4 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.72■□□□□ 0.43
SHISA3A0PJX4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHISA3A0PJX4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHISA3A0PJX4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHISA3A0PJX4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHISA3A0PJX4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHISA3A0PJX4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHISA3A0PJX4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
SHISA3A0PJX4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHISA3A0PJX4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHISA3A0PJX4 BX842568.3-201ENST00000418104 571 ntBASIC17.71■□□□□ 0.43
SHISA3A0PJX4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.71■□□□□ 0.43
SHISA3A0PJX4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.71■□□□□ 0.43
SHISA3A0PJX4 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.71■□□□□ 0.43
SHISA3A0PJX4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHISA3A0PJX4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.71■□□□□ 0.43
SHISA3A0PJX4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SHISA3A0PJX4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.71■□□□□ 0.43
SHISA3A0PJX4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.71■□□□□ 0.43
SHISA3A0PJX4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.71■□□□□ 0.43
SHISA3A0PJX4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHISA3A0PJX4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SHISA3A0PJX4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHISA3A0PJX4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHISA3A0PJX4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SHISA3A0PJX4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHISA3A0PJX4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SHISA3A0PJX4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHISA3A0PJX4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SHISA3A0PJX4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SHISA3A0PJX4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.7■□□□□ 0.42
SHISA3A0PJX4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHISA3A0PJX4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.7■□□□□ 0.42
SHISA3A0PJX4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.7■□□□□ 0.42
SHISA3A0PJX4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHISA3A0PJX4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHISA3A0PJX4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHISA3A0PJX4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHISA3A0PJX4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHISA3A0PJX4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.7■□□□□ 0.42
SHISA3A0PJX4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SHISA3A0PJX4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SHISA3A0PJX4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms