Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 AC069152.1-201ENST00000438030 544 ntBASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 MIR4758-201ENST00000577688 71 ntBASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 AL591742.1-201ENST00000604433 565 ntBASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRBV4S1A1TA0A5B7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 RBM17P2-201ENST00000616397 1405 ntBASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 KRT18P6-201ENST00000555540 1265 ntBASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 AC016405.3-201ENST00000607710 860 ntBASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TCRBV4S1A1TA0A5B7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms