Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TCRBV9S1A1TA0A576 KRT18P20-201ENST00000548986 1279 ntBASIC20.45■□□□□ 0.86
TCRBV9S1A1TA0A576 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV9S1A1TA0A576 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
TCRBV9S1A1TA0A576 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV9S1A1TA0A576 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV9S1A1TA0A576 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.45■□□□□ 0.86
TCRBV9S1A1TA0A576 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV9S1A1TA0A576 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV9S1A1TA0A576 KRT8P36-201ENST00000489121 1440 ntBASIC20.44■□□□□ 0.86
TCRBV9S1A1TA0A576 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV9S1A1TA0A576 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TCRBV9S1A1TA0A576 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV9S1A1TA0A576 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.44■□□□□ 0.86
TCRBV9S1A1TA0A576 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV9S1A1TA0A576 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV9S1A1TA0A576 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TCRBV9S1A1TA0A576 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.44■□□□□ 0.86
TCRBV9S1A1TA0A576 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.44■□□□□ 0.86
TCRBV9S1A1TA0A576 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.44■□□□□ 0.86
TCRBV9S1A1TA0A576 TERF1P2-201ENST00000583350 1212 ntBASIC20.44■□□□□ 0.86
TCRBV9S1A1TA0A576 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TCRBV9S1A1TA0A576 AC243732.1-201ENST00000612648 864 ntBASIC20.44■□□□□ 0.86
TCRBV9S1A1TA0A576 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TCRBV9S1A1TA0A576 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.44■□□□□ 0.86
TCRBV9S1A1TA0A576 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV9S1A1TA0A576 RBM17P2-201ENST00000616397 1405 ntBASIC20.44■□□□□ 0.86
TCRBV9S1A1TA0A576 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV9S1A1TA0A576 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV9S1A1TA0A576 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.43■□□□□ 0.86
TCRBV9S1A1TA0A576 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV9S1A1TA0A576 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TCRBV9S1A1TA0A576 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV9S1A1TA0A576 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.43■□□□□ 0.86
TCRBV9S1A1TA0A576 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.43■□□□□ 0.86
TCRBV9S1A1TA0A576 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.43■□□□□ 0.86
TCRBV9S1A1TA0A576 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV9S1A1TA0A576 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV9S1A1TA0A576 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV9S1A1TA0A576 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.43■□□□□ 0.86
TCRBV9S1A1TA0A576 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV9S1A1TA0A576 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV9S1A1TA0A576 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV9S1A1TA0A576 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV9S1A1TA0A576 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.43■□□□□ 0.86
TCRBV9S1A1TA0A576 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV9S1A1TA0A576 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.42■□□□□ 0.86
TCRBV9S1A1TA0A576 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV9S1A1TA0A576 DPP3P2-201ENST00000416030 1696 ntBASIC20.42■□□□□ 0.86
TCRBV9S1A1TA0A576 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TCRBV9S1A1TA0A576 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TCRBV9S1A1TA0A576 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
TCRBV9S1A1TA0A576 AL158211.5-201ENST00000623583 2518 ntBASIC20.42■□□□□ 0.86
TCRBV9S1A1TA0A576 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV9S1A1TA0A576 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV9S1A1TA0A576 AC123595.1-201ENST00000440769 1046 ntBASIC20.42■□□□□ 0.86
TCRBV9S1A1TA0A576 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.42■□□□□ 0.86
TCRBV9S1A1TA0A576 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.42■□□□□ 0.86
TCRBV9S1A1TA0A576 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV9S1A1TA0A576 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV9S1A1TA0A576 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.42■□□□□ 0.86
TCRBV9S1A1TA0A576 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV9S1A1TA0A576 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV9S1A1TA0A576 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV9S1A1TA0A576 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV9S1A1TA0A576 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.41■□□□□ 0.86
TCRBV9S1A1TA0A576 AC007322.3-201ENST00000426526 701 ntBASIC20.41■□□□□ 0.86
TCRBV9S1A1TA0A576 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.41■□□□□ 0.86
TCRBV9S1A1TA0A576 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.41■□□□□ 0.86
TCRBV9S1A1TA0A576 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV9S1A1TA0A576 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV9S1A1TA0A576 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV9S1A1TA0A576 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV9S1A1TA0A576 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TCRBV9S1A1TA0A576 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV9S1A1TA0A576 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.4■□□□□ 0.86
TCRBV9S1A1TA0A576 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.4■□□□□ 0.86
TCRBV9S1A1TA0A576 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV9S1A1TA0A576 AL691432.2-201ENST00000607222 2038 ntBASIC20.4■□□□□ 0.86
TCRBV9S1A1TA0A576 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.4■□□□□ 0.86
TCRBV9S1A1TA0A576 AC116562.4-201ENST00000641316 2276 ntBASIC20.4■□□□□ 0.86
TCRBV9S1A1TA0A576 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TCRBV9S1A1TA0A576 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.39■□□□□ 0.86
TCRBV9S1A1TA0A576 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
TCRBV9S1A1TA0A576 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TCRBV9S1A1TA0A576 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
TCRBV9S1A1TA0A576 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
TCRBV9S1A1TA0A576 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
TCRBV9S1A1TA0A576 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
TCRBV9S1A1TA0A576 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TCRBV9S1A1TA0A576 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV9S1A1TA0A576 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV9S1A1TA0A576 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV9S1A1TA0A576 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
TCRBV9S1A1TA0A576 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.39■□□□□ 0.85
TCRBV9S1A1TA0A576 AC004854.2-201ENST00000608450 1441 ntBASIC20.39■□□□□ 0.85
TCRBV9S1A1TA0A576 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.39■□□□□ 0.85
TCRBV9S1A1TA0A576 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.39■□□□□ 0.85
TCRBV9S1A1TA0A576 SLC7A5P1-201ENST00000568957 537 ntBASIC20.39■□□□□ 0.85
TCRBV9S1A1TA0A576 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms