Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 FAM197Y4-202ENST00000622692 608 ntBASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 BID-212ENST00000614949 1988 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV10A0A0B4J240 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.33□□□□□ -0.11
TRAV10A0A0B4J240 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC14.33□□□□□ -0.11
TRAV10A0A0B4J240 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV10A0A0B4J240 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.33□□□□□ -0.11
TRAV10A0A0B4J240 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC14.33□□□□□ -0.11
TRAV10A0A0B4J240 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 LINC00565-201ENST00000562710 2331 ntBASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV10A0A0B4J240 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 POM121L13P-201ENST00000422362 380 ntBASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 UBE2SP1-201ENST00000450587 669 ntBASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 C1QBPP2-201ENST00000528754 825 ntBASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV10A0A0B4J240 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms