Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV13-2A0A0B4J235 AC092720.2-201ENST00000602388 1665 ntBASIC13.43□□□□□ -0.26
TRAV13-2A0A0B4J235 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV13-2A0A0B4J235 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV13-2A0A0B4J235 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV13-2A0A0B4J235 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 AC010141.3-201ENST00000456659 717 ntBASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 CLTA-210ENST00000540080 989 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-2A0A0B4J235 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 STX4-202ENST00000394998 1498 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRAV13-2A0A0B4J235 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 AC005332.7-201ENST00000614046 2005 ntBASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 AC026471.1-201ENST00000564629 3026 ntBASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 AC133637.1-201ENST00000624115 1537 ntBASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 LETM1P2-201ENST00000597330 2178 ntBASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 SENP5-202ENST00000419026 973 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 AL158211.5-201ENST00000623583 2518 ntBASIC13.4□□□□□ -0.26
TRAV13-2A0A0B4J235 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms