Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV19A0A0A6YYK7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV19A0A0A6YYK7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV19A0A0A6YYK7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV19A0A0A6YYK7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV19A0A0A6YYK7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.09■□□□□ 0.97
TRAV19A0A0A6YYK7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV19A0A0A6YYK7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV19A0A0A6YYK7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.08■□□□□ 0.97
TRAV19A0A0A6YYK7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV19A0A0A6YYK7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV19A0A0A6YYK7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV19A0A0A6YYK7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV19A0A0A6YYK7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV19A0A0A6YYK7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV19A0A0A6YYK7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TRAV19A0A0A6YYK7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV19A0A0A6YYK7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV19A0A0A6YYK7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV19A0A0A6YYK7 KRT8P36-201ENST00000489121 1440 ntBASIC21.08■□□□□ 0.97
TRAV19A0A0A6YYK7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.08■□□□□ 0.97
TRAV19A0A0A6YYK7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.08■□□□□ 0.97
TRAV19A0A0A6YYK7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRAV19A0A0A6YYK7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRAV19A0A0A6YYK7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRAV19A0A0A6YYK7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.07■□□□□ 0.96
TRAV19A0A0A6YYK7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TRAV19A0A0A6YYK7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.06■□□□□ 0.96
TRAV19A0A0A6YYK7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV19A0A0A6YYK7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV19A0A0A6YYK7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV19A0A0A6YYK7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV19A0A0A6YYK7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TRAV19A0A0A6YYK7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV19A0A0A6YYK7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
TRAV19A0A0A6YYK7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.06■□□□□ 0.96
TRAV19A0A0A6YYK7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TRAV19A0A0A6YYK7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV19A0A0A6YYK7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.06■□□□□ 0.96
TRAV19A0A0A6YYK7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.06■□□□□ 0.96
TRAV19A0A0A6YYK7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV19A0A0A6YYK7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV19A0A0A6YYK7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV19A0A0A6YYK7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV19A0A0A6YYK7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV19A0A0A6YYK7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
TRAV19A0A0A6YYK7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV19A0A0A6YYK7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV19A0A0A6YYK7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV19A0A0A6YYK7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV19A0A0A6YYK7 MIR718-201ENST00000390190 70 ntBASIC21.05■□□□□ 0.96
TRAV19A0A0A6YYK7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.05■□□□□ 0.96
TRAV19A0A0A6YYK7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV19A0A0A6YYK7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.05■□□□□ 0.96
TRAV19A0A0A6YYK7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.05■□□□□ 0.96
TRAV19A0A0A6YYK7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.05■□□□□ 0.96
TRAV19A0A0A6YYK7 MTDHP1-201ENST00000605323 784 ntBASIC21.05■□□□□ 0.96
TRAV19A0A0A6YYK7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.05■□□□□ 0.96
TRAV19A0A0A6YYK7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.05■□□□□ 0.96
TRAV19A0A0A6YYK7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV19A0A0A6YYK7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV19A0A0A6YYK7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.05■□□□□ 0.96
TRAV19A0A0A6YYK7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV19A0A0A6YYK7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.04■□□□□ 0.96
TRAV19A0A0A6YYK7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV19A0A0A6YYK7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms