Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 AC097381.1-201ENST00000429019 1296 ntBASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 TPRG1LP1-201ENST00000598702 760 ntBASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 AC079140.4-201ENST00000507448 529 ntBASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 MIR6821-201ENST00000617625 74 ntBASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 PLK5-205ENST00000642079 1969 ntBASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 AC034268.1-201ENST00000441047 882 ntBASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 AC112907.3-201ENST00000577781 2400 ntBASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.33□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms