Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-3A0A0A0MS03 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-3A0A0A0MS03 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-3A0A0A0MS03 AC019069.1-201ENST00000610008 1333 ntBASIC19.06■□□□□ 0.64
TRBV5-3A0A0A0MS03 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TRBV5-3A0A0A0MS03 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-3A0A0A0MS03 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRBV5-3A0A0A0MS03 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.06■□□□□ 0.64
TRBV5-3A0A0A0MS03 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.06■□□□□ 0.64
TRBV5-3A0A0A0MS03 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-3A0A0A0MS03 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-3A0A0A0MS03 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.06■□□□□ 0.64
TRBV5-3A0A0A0MS03 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.06■□□□□ 0.64
TRBV5-3A0A0A0MS03 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TRBV5-3A0A0A0MS03 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TRBV5-3A0A0A0MS03 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-3A0A0A0MS03 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV5-3A0A0A0MS03 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.05■□□□□ 0.64
TRBV5-3A0A0A0MS03 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TRBV5-3A0A0A0MS03 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV5-3A0A0A0MS03 AC005837.3-201ENST00000612163 286 ntBASIC19.05■□□□□ 0.64
TRBV5-3A0A0A0MS03 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.05■□□□□ 0.64
TRBV5-3A0A0A0MS03 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV5-3A0A0A0MS03 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TRBV5-3A0A0A0MS03 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV5-3A0A0A0MS03 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV5-3A0A0A0MS03 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV5-3A0A0A0MS03 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-3A0A0A0MS03 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TRBV5-3A0A0A0MS03 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.04■□□□□ 0.64
TRBV5-3A0A0A0MS03 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.04■□□□□ 0.64
TRBV5-3A0A0A0MS03 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-3A0A0A0MS03 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.04■□□□□ 0.64
TRBV5-3A0A0A0MS03 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.04■□□□□ 0.64
TRBV5-3A0A0A0MS03 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.04■□□□□ 0.64
TRBV5-3A0A0A0MS03 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
TRBV5-3A0A0A0MS03 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.04■□□□□ 0.64
TRBV5-3A0A0A0MS03 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.04■□□□□ 0.64
TRBV5-3A0A0A0MS03 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-3A0A0A0MS03 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.04■□□□□ 0.64
TRBV5-3A0A0A0MS03 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-3A0A0A0MS03 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.04■□□□□ 0.64
TRBV5-3A0A0A0MS03 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-3A0A0A0MS03 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-3A0A0A0MS03 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 AC004854.2-201ENST00000608450 1441 ntBASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 FAM21FP-204ENST00000608637 956 ntBASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TRBV5-3A0A0A0MS03 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-3A0A0A0MS03 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
TRBV5-3A0A0A0MS03 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV5-3A0A0A0MS03 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV5-3A0A0A0MS03 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 BX323043.1-201ENST00000641006 1765 ntBASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms