Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 AC011298.3-201ENST00000615796 283 ntBASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGKV2-28A0A075B6P5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
IGKV2-28A0A075B6P5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
IGKV2-28A0A075B6P5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
IGKV2-28A0A075B6P5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
IGKV2-28A0A075B6P5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.4□□□□□ -0.27
IGKV2-28A0A075B6P5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 AC131281.2-201ENST00000520478 145 ntBASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 AP005435.1-201ENST00000529293 1178 ntBASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
IGKV2-28A0A075B6P5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV2-28A0A075B6P5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
IGKV2-28A0A075B6P5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.38□□□□□ -0.27
IGKV2-28A0A075B6P5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV2-28A0A075B6P5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV2-28A0A075B6P5 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC13.38□□□□□ -0.27
IGKV2-28A0A075B6P5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGKV2-28A0A075B6P5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms