Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 PAICSP5-201ENST00000430406 1217 ntBASIC8.67□□□□□ -1.02
NCDNQ9UBB6 AC019185.3-201ENST00000438805 323 ntBASIC8.67□□□□□ -1.02
NCDNQ9UBB6 AC012494.1-201ENST00000439259 1103 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 LINC01747-202ENST00000441568 2320 ntTSL 2 BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 CPA4-202ENST00000445470 2718 ntTSL 2 BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 RPL34P1-201ENST00000450455 354 ntBASIC8.67□□□□□ -1.02
NCDNQ9UBB6 SNX18P8-201ENST00000455120 874 ntBASIC8.67□□□□□ -1.02
NCDNQ9UBB6 BHLHB9-205ENST00000457056 4082 ntAPPRIS P1 TSL 4 BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 PTP4A2-201ENST00000457805 1032 ntTSL 2 BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 RNU6-775P-201ENST00000459318 96 ntBASIC8.67□□□□□ -1.02
NCDNQ9UBB6 SEC16B-204ENST00000464631 2948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 AL031073.1-201ENST00000503029 1139 ntBASIC8.67□□□□□ -1.02
NCDNQ9UBB6 ACTR6P1-201ENST00000514311 1104 ntBASIC8.67□□□□□ -1.02
NCDNQ9UBB6 CDV3-209ENST00000515421 1305 ntTSL 3 BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 AP003174.3-201ENST00000537926 516 ntBASIC8.67□□□□□ -1.02
NCDNQ9UBB6 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 HIF1A-AS2-201ENST00000554254 533 ntTSL 3 BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 AC010809.2-201ENST00000560404 964 ntTSL 5 BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 FAM222B-214ENST00000583953 564 ntTSL 4 BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 ZNF559-ZNF177-205ENST00000602856 419 ntTSL 5 BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 MIR6731-201ENST00000614863 72 ntBASIC8.67□□□□□ -1.02
NCDNQ9UBB6 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC8.67□□□□□ -1.02
NCDNQ9UBB6 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 ENSA-215ENST00000638926 360 ntTSL 5 BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 MIR193BHG-210ENST00000641327 515 ntBASIC8.67□□□□□ -1.02
NCDNQ9UBB6 STARD4-212ENST00000512160 3500 ntTSL 2 BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 TIMP2-203ENST00000585421 3345 ntTSL 3 BASIC8.67□□□□□ -1.02
NCDNQ9UBB6 AC100827.4-201ENST00000563464 2441 ntBASIC8.66□□□□□ -1.02
NCDNQ9UBB6 AL451074.2-201ENST00000423121 2150 ntTSL 2 BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 LINC00243-201ENST00000399196 2052 ntTSL 2 BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 GDF9-206ENST00000624492 1823 ntTSL 2 BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 GLT8D2-202ENST00000546436 1578 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 CASP5-202ENST00000393141 1488 ntTSL 5 BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 FBXW11P1-201ENST00000393804 1474 ntBASIC8.66□□□□□ -1.02
NCDNQ9UBB6 NOL11-201ENST00000253247 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 GTF2H2-201ENST00000274400 4336 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 AC012354.1-201ENST00000425325 2685 ntTSL 3 BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 COX6C-201ENST00000297564 433 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 LINC00970-201ENST00000366408 1129 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 ANXA2P3-201ENST00000404883 1008 ntBASIC8.66□□□□□ -1.02
NCDNQ9UBB6 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 LINC01399-201ENST00000423311 648 ntTSL 3 BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 OR4A47-201ENST00000446524 1064 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 QTRT2-215ENST00000493014 1046 ntTSL 2 BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 OR10J8P-201ENST00000504659 929 ntBASIC8.66□□□□□ -1.02
NCDNQ9UBB6 COX6C-203ENST00000518171 724 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 LDHA-220ENST00000542179 1288 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 AC020612.1-201ENST00000547655 541 ntBASIC8.66□□□□□ -1.02
NCDNQ9UBB6 AC084759.2-202ENST00000557976 1053 ntTSL 5 BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 RN7SL203P-201ENST00000579600 296 ntBASIC8.66□□□□□ -1.02
NCDNQ9UBB6 SLC6A21P-201ENST00000599458 369 ntBASIC8.66□□□□□ -1.02
NCDNQ9UBB6 AL118556.2-201ENST00000614375 824 ntBASIC8.66□□□□□ -1.02
NCDNQ9UBB6 AC245505.3-201ENST00000616788 358 ntBASIC8.66□□□□□ -1.02
NCDNQ9UBB6 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 AC009950.2-201ENST00000636548 183 ntBASIC8.66□□□□□ -1.02
NCDNQ9UBB6 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 MARK3-207ENST00000553942 2298 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 ZNF649-207ENST00000600738 2283 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 SF3B1-211ENST00000487698 2127 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 AL353625.1-201ENST00000569097 3131 ntBASIC8.66□□□□□ -1.02
NCDNQ9UBB6 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 HSPA9P1-201ENST00000432228 2029 ntBASIC8.66□□□□□ -1.02
NCDNQ9UBB6 AP001527.1-201ENST00000566440 1957 ntBASIC8.66□□□□□ -1.02
NCDNQ9UBB6 GDNF-AS1-205ENST00000637926 3819 ntTSL 5 BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 RSPH4A-203ENST00000368581 2704 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 CTPS2-202ENST00000380241 3526 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NCDNQ9UBB6 ACAP2-215ENST00000618471 3207 ntTSL 5 BASIC8.65□□□□□ -1.02
NCDNQ9UBB6 POU3F4-201ENST00000373200 3878 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
NCDNQ9UBB6 LINC02525-202ENST00000435043 1505 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
NCDNQ9UBB6 SPATA13-204ENST00000399949 3026 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
NCDNQ9UBB6 RAD21-201ENST00000297338 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
NCDNQ9UBB6 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
NCDNQ9UBB6 COL21A1-201ENST00000244728 4339 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
NCDNQ9UBB6 AKAP4-202ENST00000376064 2864 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
NCDNQ9UBB6 STAG3-219ENST00000620100 4203 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
NCDNQ9UBB6 PPP2R1B-201ENST00000311129 2082 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.02
NCDNQ9UBB6 PPP4R1L-202ENST00000334187 2746 ntBASIC8.65□□□□□ -1.02
NCDNQ9UBB6 SERPINB6-202ENST00000380520 3265 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
NCDNQ9UBB6 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
NCDNQ9UBB6 CDC27-204ENST00000527547 2579 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
NCDNQ9UBB6 CSF2RA-203ENST00000381500 1283 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms