Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC079031.2-201ENST00000537742 615 ntBASIC8.93□□□□□ -0.98
SLC1A1P43005 DRAIC-204ENST00000558781 1222 ntTSL 5 BASIC8.93□□□□□ -0.98
SLC1A1P43005 CDRT7-201ENST00000568256 767 ntTSL 3 BASIC8.93□□□□□ -0.98
SLC1A1P43005 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC8.93□□□□□ -0.98
SLC1A1P43005 WFDC21P-207ENST00000590346 630 ntTSL 3 BASIC8.93□□□□□ -0.98
SLC1A1P43005 AC063977.1-201ENST00000600623 371 ntBASIC8.93□□□□□ -0.98
SLC1A1P43005 Metazoa_SRP.62-201ENST00000619972 268 ntBASIC8.93□□□□□ -0.98
SLC1A1P43005 Metazoa_SRP.45-201ENST00000620896 299 ntBASIC8.93□□□□□ -0.98
SLC1A1P43005 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
SLC1A1P43005 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
SLC1A1P43005 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SLC1A1P43005 AL512504.2-201ENST00000445455 1909 ntBASIC8.93□□□□□ -0.98
SLC1A1P43005 SP100-206ENST00000409897 2037 ntTSL 2 BASIC8.93□□□□□ -0.98
SLC1A1P43005 LINC01180-201ENST00000589259 2025 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SLC1A1P43005 MS4A10-201ENST00000308287 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SLC1A1P43005 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC8.93□□□□□ -0.98
SLC1A1P43005 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SLC1A1P43005 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
SLC1A1P43005 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SLC1A1P43005 AL137782.1-201ENST00000563635 4128 ntTSL 5 BASIC8.92□□□□□ -0.98
SLC1A1P43005 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
SLC1A1P43005 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SLC1A1P43005 HHAT-203ENST00000367010 3626 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
SLC1A1P43005 SNTG1-207ENST00000522124 3504 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SLC1A1P43005 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SLC1A1P43005 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC8.92□□□□□ -0.98
SLC1A1P43005 AC108451.1-201ENST00000558208 2520 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SLC1A1P43005 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC8.92□□□□□ -0.98
SLC1A1P43005 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SLC1A1P43005 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SLC1A1P43005 SKAP1-201ENST00000336915 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SLC1A1P43005 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC8.92□□□□□ -0.98
SLC1A1P43005 HK1-203ENST00000360289 3961 ntTSL 5 BASIC8.92□□□□□ -0.98
SLC1A1P43005 OR10K1-201ENST00000289451 1073 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
SLC1A1P43005 RNA5SP379-201ENST00000364599 113 ntBASIC8.92□□□□□ -0.98
SLC1A1P43005 RN7SKP204-201ENST00000365481 310 ntBASIC8.92□□□□□ -0.98
SLC1A1P43005 LINC00272-201ENST00000367563 740 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SLC1A1P43005 EPPIN-203ENST00000409554 998 ntTSL 5 BASIC8.92□□□□□ -0.98
SLC1A1P43005 RNA5SP221-201ENST00000411271 103 ntBASIC8.92□□□□□ -0.98
SLC1A1P43005 RPL7P13-201ENST00000415103 741 ntBASIC8.92□□□□□ -0.98
SLC1A1P43005 CCDC144NL-AS1-202ENST00000423473 839 ntTSL 5 BASIC8.92□□□□□ -0.98
SLC1A1P43005 ISX-AS1-201ENST00000427881 202 ntTSL 3 BASIC8.92□□□□□ -0.98
SLC1A1P43005 AC099066.1-201ENST00000428148 534 ntTSL 5 BASIC8.92□□□□□ -0.98
SLC1A1P43005 AL445189.2-201ENST00000447543 259 ntBASIC8.92□□□□□ -0.98
SLC1A1P43005 GAPDHP45-201ENST00000452090 349 ntBASIC8.92□□□□□ -0.98
SLC1A1P43005 LINC01738-201ENST00000454285 815 ntTSL 3 BASIC8.92□□□□□ -0.98
SLC1A1P43005 PSMD6-AS1-201ENST00000462717 441 ntTSL 3 BASIC8.92□□□□□ -0.98
SLC1A1P43005 RPL7AP8-201ENST00000481963 804 ntBASIC8.92□□□□□ -0.98
SLC1A1P43005 AC055758.2-202ENST00000482351 624 ntTSL 2 BASIC8.92□□□□□ -0.98
SLC1A1P43005 MIR3945HG-202ENST00000511703 729 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SLC1A1P43005 RPL23AP96-201ENST00000514593 591 ntBASIC8.92□□□□□ -0.98
SLC1A1P43005 IGKV3-25-201ENST00000523155 253 ntBASIC8.92□□□□□ -0.98
SLC1A1P43005 AC009652.1-201ENST00000528326 648 ntTSL 5 BASIC8.92□□□□□ -0.98
SLC1A1P43005 AC007907.1-201ENST00000557953 451 ntTSL 3 BASIC8.92□□□□□ -0.98
SLC1A1P43005 AC036108.1-201ENST00000559468 588 ntTSL 4 BASIC8.92□□□□□ -0.98
SLC1A1P43005 AC013452.1-201ENST00000560630 598 ntBASIC8.92□□□□□ -0.98
SLC1A1P43005 AC093249.5-201ENST00000568120 430 ntBASIC8.92□□□□□ -0.98
SLC1A1P43005 RN7SL711P-201ENST00000579731 299 ntBASIC8.92□□□□□ -0.98
SLC1A1P43005 AC026458.2-201ENST00000589323 531 ntTSL 5 BASIC8.92□□□□□ -0.98
SLC1A1P43005 AC004257.1-201ENST00000593588 277 ntTSL 5 BASIC8.92□□□□□ -0.98
SLC1A1P43005 HMGN2P46-208ENST00000598619 490 ntBASIC8.92□□□□□ -0.98
SLC1A1P43005 AC174071.1-201ENST00000603069 517 ntBASIC8.92□□□□□ -0.98
SLC1A1P43005 AC011894.1-201ENST00000603255 456 ntBASIC8.92□□□□□ -0.98
SLC1A1P43005 uc_338.2-201ENST00000612963 182 ntBASIC8.92□□□□□ -0.98
SLC1A1P43005 CU639417.5-201ENST00000623983 476 ntTSL 3 BASIC8.92□□□□□ -0.98
SLC1A1P43005 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC8.92□□□□□ -0.98
SLC1A1P43005 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SLC1A1P43005 LINC01856-201ENST00000450840 2398 ntTSL 2 BASIC8.92□□□□□ -0.98
SLC1A1P43005 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SLC1A1P43005 AL049776.1-201ENST00000624600 2025 ntBASIC8.92□□□□□ -0.98
SLC1A1P43005 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
SLC1A1P43005 AOX2P-204ENST00000487742 3284 ntBASIC8.92□□□□□ -0.98
SLC1A1P43005 AC019155.2-201ENST00000420224 1918 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SLC1A1P43005 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SLC1A1P43005 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SLC1A1P43005 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
SLC1A1P43005 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SLC1A1P43005 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SLC1A1P43005 AL356289.3-201ENST00000640049 2669 ntBASIC8.91□□□□□ -0.98
SLC1A1P43005 TCF4-241ENST00000568740 2628 ntTSL 5 BASIC8.91□□□□□ -0.98
SLC1A1P43005 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
SLC1A1P43005 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
SLC1A1P43005 TNMD-201ENST00000373031 1339 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SLC1A1P43005 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SLC1A1P43005 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SLC1A1P43005 AC211476.4-201ENST00000275546 699 ntBASIC8.91□□□□□ -0.98
SLC1A1P43005 RN7SKP79-201ENST00000363373 336 ntBASIC8.91□□□□□ -0.98
SLC1A1P43005 APOM-202ENST00000375918 922 ntTSL 2 BASIC8.91□□□□□ -0.98
SLC1A1P43005 PMS2P5-201ENST00000398065 516 ntBASIC8.91□□□□□ -0.98
SLC1A1P43005 AL590617.1-201ENST00000405630 748 ntBASIC8.91□□□□□ -0.98
SLC1A1P43005 TYROBP-202ENST00000424586 541 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SLC1A1P43005 PAICSP5-201ENST00000430406 1217 ntBASIC8.91□□□□□ -0.98
SLC1A1P43005 LMNTD1-203ENST00000445693 1285 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
SLC1A1P43005 AL590648.3-201ENST00000446962 473 ntTSL 3 BASIC8.91□□□□□ -0.98
SLC1A1P43005 ASS1P12-201ENST00000452496 1227 ntBASIC8.91□□□□□ -0.98
SLC1A1P43005 NPAP1P2-201ENST00000456716 1234 ntBASIC8.91□□□□□ -0.98
SLC1A1P43005 RPL3P10-201ENST00000476002 1164 ntBASIC8.91□□□□□ -0.98
SLC1A1P43005 AC010307.4-202ENST00000507403 389 ntTSL 3 BASIC8.91□□□□□ -0.98
SLC1A1P43005 AF186996.2-201ENST00000508347 907 ntBASIC8.91□□□□□ -0.98
SLC1A1P43005 IGHVIII-67-3-201ENST00000517650 232 ntBASIC8.91□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms