Protein–RNA interactions for Protein: S4R3C0

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S4R3C0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
S4R3C0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.04■□□□□ 0.16
S4R3C0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
S4R3C0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
S4R3C0 AC116050.2-201ENST00000612102 1779 ntBASIC16.04■□□□□ 0.16
S4R3C0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
S4R3C0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
S4R3C0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
S4R3C0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.04■□□□□ 0.16
S4R3C0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
S4R3C0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
S4R3C0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
S4R3C0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.04■□□□□ 0.16
S4R3C0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.03■□□□□ 0.16
S4R3C0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.03■□□□□ 0.16
S4R3C0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.03■□□□□ 0.16
S4R3C0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
S4R3C0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
S4R3C0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
S4R3C0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.03■□□□□ 0.16
S4R3C0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.03■□□□□ 0.16
S4R3C0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.03■□□□□ 0.16
S4R3C0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.03■□□□□ 0.16
S4R3C0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
S4R3C0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.03■□□□□ 0.16
S4R3C0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.03■□□□□ 0.16
S4R3C0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
S4R3C0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
S4R3C0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
S4R3C0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
S4R3C0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
S4R3C0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
S4R3C0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
S4R3C0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
S4R3C0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
S4R3C0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
S4R3C0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.02■□□□□ 0.16
S4R3C0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
S4R3C0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
S4R3C0 LINC01521-201ENST00000504184 1943 ntBASIC16.02■□□□□ 0.16
S4R3C0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
S4R3C0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
S4R3C0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
S4R3C0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
S4R3C0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
S4R3C0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.02■□□□□ 0.16
S4R3C0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
S4R3C0 AC010536.3-201ENST00000620306 533 ntBASIC16.02■□□□□ 0.16
S4R3C0 SLC25A24-204ENST00000569674 2357 ntBASIC16.02■□□□□ 0.15
S4R3C0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
S4R3C0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
S4R3C0 AP005212.1-201ENST00000581547 1997 ntBASIC16.02■□□□□ 0.15
S4R3C0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
S4R3C0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.01■□□□□ 0.15
S4R3C0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
S4R3C0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
S4R3C0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
S4R3C0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
S4R3C0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.01■□□□□ 0.15
S4R3C0 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.01■□□□□ 0.15
S4R3C0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
S4R3C0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
S4R3C0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
S4R3C0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
S4R3C0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.01■□□□□ 0.15
S4R3C0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
S4R3C0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
S4R3C0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
S4R3C0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
S4R3C0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
S4R3C0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
S4R3C0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
S4R3C0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
S4R3C0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
S4R3C0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
S4R3C0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
S4R3C0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.01■□□□□ 0.15
S4R3C0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
S4R3C0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.01■□□□□ 0.15
S4R3C0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
S4R3C0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
S4R3C0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
S4R3C0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
S4R3C0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16■□□□□ 0.15
S4R3C0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
S4R3C0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16■□□□□ 0.15
S4R3C0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
S4R3C0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16■□□□□ 0.15
S4R3C0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16■□□□□ 0.15
S4R3C0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
S4R3C0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16■□□□□ 0.15
S4R3C0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
S4R3C0 SLC7A5P1-201ENST00000568957 537 ntBASIC16■□□□□ 0.15
S4R3C0 MFSD11-216ENST00000590393 1141 ntBASIC16■□□□□ 0.15
S4R3C0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16■□□□□ 0.15
S4R3C0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
S4R3C0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16■□□□□ 0.15
S4R3C0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
S4R3C0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
S4R3C0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms