Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
DNMT3AQ9Y6K1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
DNMT3AQ9Y6K1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.98■□□□□ 0.79
DNMT3AQ9Y6K1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DNMT3AQ9Y6K1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DNMT3AQ9Y6K1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DNMT3AQ9Y6K1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DNMT3AQ9Y6K1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.97■□□□□ 0.79
DNMT3AQ9Y6K1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DNMT3AQ9Y6K1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DNMT3AQ9Y6K1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
DNMT3AQ9Y6K1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
DNMT3AQ9Y6K1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
DNMT3AQ9Y6K1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DNMT3AQ9Y6K1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.97■□□□□ 0.79
DNMT3AQ9Y6K1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.97■□□□□ 0.79
DNMT3AQ9Y6K1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
DNMT3AQ9Y6K1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DNMT3AQ9Y6K1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.96■□□□□ 0.79
DNMT3AQ9Y6K1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
DNMT3AQ9Y6K1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DNMT3AQ9Y6K1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.96■□□□□ 0.79
DNMT3AQ9Y6K1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DNMT3AQ9Y6K1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.96■□□□□ 0.79
DNMT3AQ9Y6K1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DNMT3AQ9Y6K1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
DNMT3AQ9Y6K1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.96■□□□□ 0.79
DNMT3AQ9Y6K1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
DNMT3AQ9Y6K1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.96■□□□□ 0.79
DNMT3AQ9Y6K1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.96■□□□□ 0.79
DNMT3AQ9Y6K1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
DNMT3AQ9Y6K1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
DNMT3AQ9Y6K1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DNMT3AQ9Y6K1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
DNMT3AQ9Y6K1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DNMT3AQ9Y6K1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
DNMT3AQ9Y6K1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.95■□□□□ 0.78
DNMT3AQ9Y6K1 AL137060.1-201ENST00000618151 2648 ntBASIC19.95■□□□□ 0.78
DNMT3AQ9Y6K1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DNMT3AQ9Y6K1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
DNMT3AQ9Y6K1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DNMT3AQ9Y6K1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
DNMT3AQ9Y6K1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.95■□□□□ 0.78
DNMT3AQ9Y6K1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
DNMT3AQ9Y6K1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
DNMT3AQ9Y6K1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DNMT3AQ9Y6K1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
DNMT3AQ9Y6K1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.95■□□□□ 0.78
DNMT3AQ9Y6K1 AC007225.1-201ENST00000566331 1836 ntBASIC19.95■□□□□ 0.78
DNMT3AQ9Y6K1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.94■□□□□ 0.78
DNMT3AQ9Y6K1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
DNMT3AQ9Y6K1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DNMT3AQ9Y6K1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DNMT3AQ9Y6K1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
DNMT3AQ9Y6K1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DNMT3AQ9Y6K1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DNMT3AQ9Y6K1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DNMT3AQ9Y6K1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DNMT3AQ9Y6K1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.94■□□□□ 0.78
DNMT3AQ9Y6K1 KRT18P6-201ENST00000555540 1265 ntBASIC19.94■□□□□ 0.78
DNMT3AQ9Y6K1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
DNMT3AQ9Y6K1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.94■□□□□ 0.78
DNMT3AQ9Y6K1 AC083880.1-201ENST00000608266 535 ntBASIC19.94■□□□□ 0.78
DNMT3AQ9Y6K1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
DNMT3AQ9Y6K1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DNMT3AQ9Y6K1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DNMT3AQ9Y6K1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNMT3AQ9Y6K1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNMT3AQ9Y6K1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNMT3AQ9Y6K1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNMT3AQ9Y6K1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.93■□□□□ 0.78
DNMT3AQ9Y6K1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNMT3AQ9Y6K1 PKD1P6-201ENST00000343738 4769 ntBASIC19.93■□□□□ 0.78
DNMT3AQ9Y6K1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNMT3AQ9Y6K1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.93■□□□□ 0.78
DNMT3AQ9Y6K1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.93■□□□□ 0.78
DNMT3AQ9Y6K1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DNMT3AQ9Y6K1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
DNMT3AQ9Y6K1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNMT3AQ9Y6K1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.93■□□□□ 0.78
DNMT3AQ9Y6K1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.93■□□□□ 0.78
DNMT3AQ9Y6K1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.93■□□□□ 0.78
DNMT3AQ9Y6K1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNMT3AQ9Y6K1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNMT3AQ9Y6K1 SLC25A24-204ENST00000569674 2357 ntBASIC19.93■□□□□ 0.78
DNMT3AQ9Y6K1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNMT3AQ9Y6K1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DNMT3AQ9Y6K1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DNMT3AQ9Y6K1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.92■□□□□ 0.78
DNMT3AQ9Y6K1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DNMT3AQ9Y6K1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.92■□□□□ 0.78
DNMT3AQ9Y6K1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
DNMT3AQ9Y6K1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.92■□□□□ 0.78
DNMT3AQ9Y6K1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
DNMT3AQ9Y6K1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.92■□□□□ 0.78
DNMT3AQ9Y6K1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.92■□□□□ 0.78
DNMT3AQ9Y6K1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DNMT3AQ9Y6K1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DNMT3AQ9Y6K1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DNMT3AQ9Y6K1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms