Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX9Q9Y5X1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX9Q9Y5X1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SNX9Q9Y5X1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SNX9Q9Y5X1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SNX9Q9Y5X1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX9Q9Y5X1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SNX9Q9Y5X1 RNA5SP413-201ENST00000516373 109 ntBASIC21.81■■□□□ 1.08
SNX9Q9Y5X1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SNX9Q9Y5X1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.81■■□□□ 1.08
SNX9Q9Y5X1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX9Q9Y5X1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX9Q9Y5X1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.81■■□□□ 1.08
SNX9Q9Y5X1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX9Q9Y5X1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX9Q9Y5X1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX9Q9Y5X1 KRT8P36-201ENST00000489121 1440 ntBASIC21.8■■□□□ 1.08
SNX9Q9Y5X1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.8■■□□□ 1.08
SNX9Q9Y5X1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
SNX9Q9Y5X1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SNX9Q9Y5X1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX9Q9Y5X1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX9Q9Y5X1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.8■■□□□ 1.08
SNX9Q9Y5X1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX9Q9Y5X1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX9Q9Y5X1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX9Q9Y5X1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.8■■□□□ 1.08
SNX9Q9Y5X1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNX9Q9Y5X1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SNX9Q9Y5X1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNX9Q9Y5X1 AL121603.2-201ENST00000557373 2117 ntBASIC21.8■■□□□ 1.08
SNX9Q9Y5X1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.8■■□□□ 1.08
SNX9Q9Y5X1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.8■■□□□ 1.08
SNX9Q9Y5X1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX9Q9Y5X1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX9Q9Y5X1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SNX9Q9Y5X1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.79■■□□□ 1.08
SNX9Q9Y5X1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SNX9Q9Y5X1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX9Q9Y5X1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX9Q9Y5X1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX9Q9Y5X1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX9Q9Y5X1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX9Q9Y5X1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.79■■□□□ 1.08
SNX9Q9Y5X1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.79■■□□□ 1.08
SNX9Q9Y5X1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNX9Q9Y5X1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.79■■□□□ 1.08
SNX9Q9Y5X1 C2orf69P4-201ENST00000565394 541 ntBASIC21.79■■□□□ 1.08
SNX9Q9Y5X1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.79■■□□□ 1.08
SNX9Q9Y5X1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX9Q9Y5X1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX9Q9Y5X1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX9Q9Y5X1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX9Q9Y5X1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNX9Q9Y5X1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SNX9Q9Y5X1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX9Q9Y5X1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX9Q9Y5X1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.78■■□□□ 1.08
SNX9Q9Y5X1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX9Q9Y5X1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.78■■□□□ 1.08
SNX9Q9Y5X1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNX9Q9Y5X1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SNX9Q9Y5X1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.78■■□□□ 1.08
SNX9Q9Y5X1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.78■■□□□ 1.08
SNX9Q9Y5X1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.78■■□□□ 1.08
SNX9Q9Y5X1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX9Q9Y5X1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX9Q9Y5X1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.78■■□□□ 1.08
SNX9Q9Y5X1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX9Q9Y5X1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SNX9Q9Y5X1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX9Q9Y5X1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.77■■□□□ 1.08
SNX9Q9Y5X1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SNX9Q9Y5X1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.77■■□□□ 1.08
SNX9Q9Y5X1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX9Q9Y5X1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX9Q9Y5X1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX9Q9Y5X1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.77■■□□□ 1.08
SNX9Q9Y5X1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX9Q9Y5X1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.77■■□□□ 1.08
SNX9Q9Y5X1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.77■■□□□ 1.08
SNX9Q9Y5X1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.77■■□□□ 1.08
SNX9Q9Y5X1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.77■■□□□ 1.08
SNX9Q9Y5X1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX9Q9Y5X1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.77■■□□□ 1.07
SNX9Q9Y5X1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SNX9Q9Y5X1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.77■■□□□ 1.07
SNX9Q9Y5X1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
SNX9Q9Y5X1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SNX9Q9Y5X1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.76■■□□□ 1.07
SNX9Q9Y5X1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX9Q9Y5X1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
SNX9Q9Y5X1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX9Q9Y5X1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX9Q9Y5X1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.76■■□□□ 1.07
SNX9Q9Y5X1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.76■■□□□ 1.07
SNX9Q9Y5X1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.76■■□□□ 1.07
SNX9Q9Y5X1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.76■■□□□ 1.07
SNX9Q9Y5X1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.76■■□□□ 1.07
SNX9Q9Y5X1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms