Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA6Q9Y5G7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA6Q9Y5G7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA6Q9Y5G7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA6Q9Y5G7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
PCDHGA6Q9Y5G7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA6Q9Y5G7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA6Q9Y5G7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
PCDHGA6Q9Y5G7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
PCDHGA6Q9Y5G7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
PCDHGA6Q9Y5G7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA6Q9Y5G7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
PCDHGA6Q9Y5G7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDHGA6Q9Y5G7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA6Q9Y5G7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.58■□□□□ 0.72
PCDHGA6Q9Y5G7 LSM12P1-201ENST00000411836 588 ntBASIC19.58■□□□□ 0.72
PCDHGA6Q9Y5G7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PCDHGA6Q9Y5G7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PCDHGA6Q9Y5G7 AC245052.3-201ENST00000450182 901 ntBASIC19.58■□□□□ 0.72
PCDHGA6Q9Y5G7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHGA6Q9Y5G7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
PCDHGA6Q9Y5G7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA6Q9Y5G7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PCDHGA6Q9Y5G7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHGA6Q9Y5G7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA6Q9Y5G7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA6Q9Y5G7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.58■□□□□ 0.72
PCDHGA6Q9Y5G7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA6Q9Y5G7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA6Q9Y5G7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDHGA6Q9Y5G7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA6Q9Y5G7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
PCDHGA6Q9Y5G7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PCDHGA6Q9Y5G7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA6Q9Y5G7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA6Q9Y5G7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA6Q9Y5G7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA6Q9Y5G7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA6Q9Y5G7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA6Q9Y5G7 CDV3P1-201ENST00000471403 739 ntBASIC19.57■□□□□ 0.72
PCDHGA6Q9Y5G7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGA6Q9Y5G7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHGA6Q9Y5G7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHGA6Q9Y5G7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA6Q9Y5G7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA6Q9Y5G7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA6Q9Y5G7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGA6Q9Y5G7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGA6Q9Y5G7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PCDHGA6Q9Y5G7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PCDHGA6Q9Y5G7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA6Q9Y5G7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA6Q9Y5G7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA6Q9Y5G7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDHGA6Q9Y5G7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA6Q9Y5G7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGA6Q9Y5G7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGA6Q9Y5G7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGA6Q9Y5G7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA6Q9Y5G7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGA6Q9Y5G7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
PCDHGA6Q9Y5G7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA6Q9Y5G7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA6Q9Y5G7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA6Q9Y5G7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGA6Q9Y5G7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PCDHGA6Q9Y5G7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHGA6Q9Y5G7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA6Q9Y5G7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA6Q9Y5G7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHGA6Q9Y5G7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA6Q9Y5G7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA6Q9Y5G7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA6Q9Y5G7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGA6Q9Y5G7 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.55■□□□□ 0.72
PCDHGA6Q9Y5G7 AC098590.1-201ENST00000468126 897 ntBASIC19.55■□□□□ 0.72
PCDHGA6Q9Y5G7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.55■□□□□ 0.72
PCDHGA6Q9Y5G7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGA6Q9Y5G7 UNC93B5-201ENST00000530315 699 ntBASIC19.55■□□□□ 0.72
PCDHGA6Q9Y5G7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGA6Q9Y5G7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA6Q9Y5G7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA6Q9Y5G7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA6Q9Y5G7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHGA6Q9Y5G7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA6Q9Y5G7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHGA6Q9Y5G7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA6Q9Y5G7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGA6Q9Y5G7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA6Q9Y5G7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA6Q9Y5G7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGA6Q9Y5G7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PCDHGA6Q9Y5G7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.54■□□□□ 0.72
PCDHGA6Q9Y5G7 GCSHP5-201ENST00000443090 522 ntBASIC19.54■□□□□ 0.72
PCDHGA6Q9Y5G7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PCDHGA6Q9Y5G7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.54■□□□□ 0.72
PCDHGA6Q9Y5G7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA6Q9Y5G7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA6Q9Y5G7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHGA6Q9Y5G7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms