Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB3Q9Y5G1 AC027702.1-201ENST00000563810 1770 ntBASIC19.27■□□□□ 0.68
PCDHGB3Q9Y5G1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB3Q9Y5G1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB3Q9Y5G1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB3Q9Y5G1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHGB3Q9Y5G1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDHGB3Q9Y5G1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB3Q9Y5G1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHGB3Q9Y5G1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHGB3Q9Y5G1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHGB3Q9Y5G1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB3Q9Y5G1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB3Q9Y5G1 AC020907.5-201ENST00000624372 1936 ntBASIC19.27■□□□□ 0.67
PCDHGB3Q9Y5G1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHGB3Q9Y5G1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHGB3Q9Y5G1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHGB3Q9Y5G1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHGB3Q9Y5G1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB3Q9Y5G1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB3Q9Y5G1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB3Q9Y5G1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB3Q9Y5G1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB3Q9Y5G1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB3Q9Y5G1 ID1-201ENST00000376105 1233 ntBASIC19.26■□□□□ 0.67
PCDHGB3Q9Y5G1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB3Q9Y5G1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHGB3Q9Y5G1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHGB3Q9Y5G1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHGB3Q9Y5G1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB3Q9Y5G1 RAP2CP1-201ENST00000605103 478 ntBASIC19.26■□□□□ 0.67
PCDHGB3Q9Y5G1 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGB3Q9Y5G1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB3Q9Y5G1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.26■□□□□ 0.67
PCDHGB3Q9Y5G1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGB3Q9Y5G1 AC011484.1-201ENST00000377652 1995 ntBASIC19.26■□□□□ 0.67
PCDHGB3Q9Y5G1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB3Q9Y5G1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PCDHGB3Q9Y5G1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGB3Q9Y5G1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGB3Q9Y5G1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB3Q9Y5G1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGB3Q9Y5G1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB3Q9Y5G1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB3Q9Y5G1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB3Q9Y5G1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDHGB3Q9Y5G1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB3Q9Y5G1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGB3Q9Y5G1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
PCDHGB3Q9Y5G1 SLC7A5P1-201ENST00000568957 537 ntBASIC19.25■□□□□ 0.67
PCDHGB3Q9Y5G1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB3Q9Y5G1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB3Q9Y5G1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHGB3Q9Y5G1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB3Q9Y5G1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGB3Q9Y5G1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB3Q9Y5G1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGB3Q9Y5G1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGB3Q9Y5G1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 CDCA4P2-201ENST00000441182 718 ntBASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 AC073111.5-205ENST00000641717 521 ntBASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB3Q9Y5G1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB3Q9Y5G1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGB3Q9Y5G1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGB3Q9Y5G1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCDHGB3Q9Y5G1 AC026185.1-201ENST00000445748 174 ntBASIC19.23■□□□□ 0.67
PCDHGB3Q9Y5G1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB3Q9Y5G1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB3Q9Y5G1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGB3Q9Y5G1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGB3Q9Y5G1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB3Q9Y5G1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHGB3Q9Y5G1 AC007952.6-201ENST00000573168 2673 ntBASIC19.23■□□□□ 0.67
PCDHGB3Q9Y5G1 AC003957.1-201ENST00000625108 2673 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms