Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB13Q9Y5F0 AF201337.1-201ENST00000520239 748 ntBASIC22.47■■□□□ 1.19
PCDHB13Q9Y5F0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB13Q9Y5F0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB13Q9Y5F0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
PCDHB13Q9Y5F0 KRT8P36-201ENST00000489121 1440 ntBASIC22.47■■□□□ 1.19
PCDHB13Q9Y5F0 AC010980.2-201ENST00000587099 1412 ntBASIC22.47■■□□□ 1.19
PCDHB13Q9Y5F0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB13Q9Y5F0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB13Q9Y5F0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB13Q9Y5F0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB13Q9Y5F0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB13Q9Y5F0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHB13Q9Y5F0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHB13Q9Y5F0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
PCDHB13Q9Y5F0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB13Q9Y5F0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.46■■□□□ 1.19
PCDHB13Q9Y5F0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHB13Q9Y5F0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB13Q9Y5F0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
PCDHB13Q9Y5F0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
PCDHB13Q9Y5F0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHB13Q9Y5F0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
PCDHB13Q9Y5F0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
PCDHB13Q9Y5F0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.45■■□□□ 1.19
PCDHB13Q9Y5F0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.45■■□□□ 1.19
PCDHB13Q9Y5F0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
PCDHB13Q9Y5F0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
PCDHB13Q9Y5F0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB13Q9Y5F0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB13Q9Y5F0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.45■■□□□ 1.18
PCDHB13Q9Y5F0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB13Q9Y5F0 AC093787.1-201ENST00000450396 207 ntBASIC22.45■■□□□ 1.18
PCDHB13Q9Y5F0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.45■■□□□ 1.18
PCDHB13Q9Y5F0 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.45■■□□□ 1.18
PCDHB13Q9Y5F0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
PCDHB13Q9Y5F0 AL356652.1-201ENST00000615962 565 ntBASIC22.45■■□□□ 1.18
PCDHB13Q9Y5F0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB13Q9Y5F0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHB13Q9Y5F0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB13Q9Y5F0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB13Q9Y5F0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB13Q9Y5F0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB13Q9Y5F0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB13Q9Y5F0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB13Q9Y5F0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB13Q9Y5F0 LINC01006-201ENST00000333319 2292 ntBASIC22.45■■□□□ 1.18
PCDHB13Q9Y5F0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
PCDHB13Q9Y5F0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHB13Q9Y5F0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHB13Q9Y5F0 KRT18P68-201ENST00000392293 1000 ntBASIC22.44■■□□□ 1.18
PCDHB13Q9Y5F0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHB13Q9Y5F0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHB13Q9Y5F0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHB13Q9Y5F0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHB13Q9Y5F0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
PCDHB13Q9Y5F0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHB13Q9Y5F0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHB13Q9Y5F0 AC105036.2-201ENST00000569468 176 ntBASIC22.44■■□□□ 1.18
PCDHB13Q9Y5F0 CYP2T3P-201ENST00000601990 817 ntBASIC22.44■■□□□ 1.18
PCDHB13Q9Y5F0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHB13Q9Y5F0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHB13Q9Y5F0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHB13Q9Y5F0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 AC073314.1-201ENST00000568729 2216 ntBASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 AC092667.1-201ENST00000434301 2586 ntBASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 AL121832.2-201ENST00000610979 668 ntBASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHB13Q9Y5F0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB13Q9Y5F0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB13Q9Y5F0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB13Q9Y5F0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB13Q9Y5F0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB13Q9Y5F0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB13Q9Y5F0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
PCDHB13Q9Y5F0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB13Q9Y5F0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHB13Q9Y5F0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHB13Q9Y5F0 AC083906.2-201ENST00000511578 360 ntBASIC22.42■■□□□ 1.18
PCDHB13Q9Y5F0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB13Q9Y5F0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB13Q9Y5F0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.42■■□□□ 1.18
PCDHB13Q9Y5F0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms