Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.51■□□□□ 0.39
MRPS28Q9Y2Q9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MRPS28Q9Y2Q9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.51■□□□□ 0.39
MRPS28Q9Y2Q9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.51■□□□□ 0.39
MRPS28Q9Y2Q9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MRPS28Q9Y2Q9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
MRPS28Q9Y2Q9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 TCF3P1-201ENST00000423021 1937 ntBASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRPS28Q9Y2Q9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
MRPS28Q9Y2Q9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MRPS28Q9Y2Q9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MRPS28Q9Y2Q9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MRPS28Q9Y2Q9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MRPS28Q9Y2Q9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
MRPS28Q9Y2Q9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MRPS28Q9Y2Q9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MRPS28Q9Y2Q9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.49■□□□□ 0.39
MRPS28Q9Y2Q9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.49■□□□□ 0.39
MRPS28Q9Y2Q9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MRPS28Q9Y2Q9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MRPS28Q9Y2Q9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.49■□□□□ 0.39
MRPS28Q9Y2Q9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MRPS28Q9Y2Q9 MIR2861-201ENST00000636310 90 ntBASIC17.49■□□□□ 0.39
MRPS28Q9Y2Q9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MRPS28Q9Y2Q9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
MRPS28Q9Y2Q9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
MRPS28Q9Y2Q9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.49■□□□□ 0.39
MRPS28Q9Y2Q9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
MRPS28Q9Y2Q9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
MRPS28Q9Y2Q9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRPS28Q9Y2Q9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRPS28Q9Y2Q9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRPS28Q9Y2Q9 AC116050.2-201ENST00000612102 1779 ntBASIC17.48■□□□□ 0.39
MRPS28Q9Y2Q9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MRPS28Q9Y2Q9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRPS28Q9Y2Q9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRPS28Q9Y2Q9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
MRPS28Q9Y2Q9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MRPS28Q9Y2Q9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRPS28Q9Y2Q9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.48■□□□□ 0.39
MRPS28Q9Y2Q9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRPS28Q9Y2Q9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRPS28Q9Y2Q9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 AC010141.2-201ENST00000452426 721 ntBASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 SUDS3P1-201ENST00000505831 966 ntBASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
MRPS28Q9Y2Q9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MRPS28Q9Y2Q9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.46■□□□□ 0.39
MRPS28Q9Y2Q9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
MRPS28Q9Y2Q9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MRPS28Q9Y2Q9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MRPS28Q9Y2Q9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.46■□□□□ 0.39
MRPS28Q9Y2Q9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MRPS28Q9Y2Q9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.46■□□□□ 0.39
MRPS28Q9Y2Q9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms