Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 SLC47A1P1-202ENST00000449666 945 ntBASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 AC004408.2-201ENST00000623613 2777 ntBASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCL1Q9Y2P8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RCL1Q9Y2P8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RCL1Q9Y2P8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RCL1Q9Y2P8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RCL1Q9Y2P8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
RCL1Q9Y2P8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RCL1Q9Y2P8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.58■□□□□ 0.24
RCL1Q9Y2P8 SRD5A1P1-201ENST00000442297 786 ntBASIC16.58■□□□□ 0.24
RCL1Q9Y2P8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.58■□□□□ 0.24
RCL1Q9Y2P8 SYT6-210ENST00000641643 1587 ntBASIC16.58■□□□□ 0.24
RCL1Q9Y2P8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCL1Q9Y2P8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RCL1Q9Y2P8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCL1Q9Y2P8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RCL1Q9Y2P8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCL1Q9Y2P8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.58■□□□□ 0.24
RCL1Q9Y2P8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCL1Q9Y2P8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCL1Q9Y2P8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCL1Q9Y2P8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.57■□□□□ 0.24
RCL1Q9Y2P8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCL1Q9Y2P8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms