Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC14.85□□□□□ -0.03
HHLA3Q9XRX5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HHLA3Q9XRX5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HHLA3Q9XRX5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.85□□□□□ -0.03
HHLA3Q9XRX5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 EEF1DP3-203ENST00000566025 782 ntBASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
HHLA3Q9XRX5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
HHLA3Q9XRX5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HHLA3Q9XRX5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HHLA3Q9XRX5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HHLA3Q9XRX5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HHLA3Q9XRX5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.83□□□□□ -0.03
HHLA3Q9XRX5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
HHLA3Q9XRX5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HHLA3Q9XRX5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HHLA3Q9XRX5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HHLA3Q9XRX5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
HHLA3Q9XRX5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HHLA3Q9XRX5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 KRT18P14-201ENST00000534205 1250 ntBASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 CCDC92B-201ENST00000575506 885 ntBASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 TERF1P2-201ENST00000583350 1212 ntBASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 AC019069.1-201ENST00000610008 1333 ntBASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 AIRN-201ENST00000601203 4374 ntBASIC14.83□□□□□ -0.04
HHLA3Q9XRX5 AC026471.1-201ENST00000564629 3026 ntBASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 AC006128.1-201ENST00000624704 1661 ntBASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 COX20-201ENST00000366528 568 ntTSL 2 BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms