Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHGC3Q9UN70 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGC3Q9UN70 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGC3Q9UN70 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGC3Q9UN70 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGC3Q9UN70 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PCDHGC3Q9UN70 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGC3Q9UN70 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDHGC3Q9UN70 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
PCDHGC3Q9UN70 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PCDHGC3Q9UN70 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGC3Q9UN70 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGC3Q9UN70 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHGC3Q9UN70 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.53■■□□□ 1.04
PCDHGC3Q9UN70 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGC3Q9UN70 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHGC3Q9UN70 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGC3Q9UN70 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHGC3Q9UN70 AC105020.6-201ENST00000621523 1217 ntBASIC21.53■■□□□ 1.04
PCDHGC3Q9UN70 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGC3Q9UN70 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGC3Q9UN70 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGC3Q9UN70 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGC3Q9UN70 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PCDHGC3Q9UN70 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGC3Q9UN70 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGC3Q9UN70 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGC3Q9UN70 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHGC3Q9UN70 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDHGC3Q9UN70 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGC3Q9UN70 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDHGC3Q9UN70 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHGC3Q9UN70 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHGC3Q9UN70 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.52■■□□□ 1.04
PCDHGC3Q9UN70 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDHGC3Q9UN70 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGC3Q9UN70 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.52■■□□□ 1.04
PCDHGC3Q9UN70 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.52■■□□□ 1.04
PCDHGC3Q9UN70 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGC3Q9UN70 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PCDHGC3Q9UN70 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
PCDHGC3Q9UN70 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.52■■□□□ 1.03
PCDHGC3Q9UN70 AL512408.1-201ENST00000569378 2000 ntBASIC21.51■■□□□ 1.03
PCDHGC3Q9UN70 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGC3Q9UN70 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGC3Q9UN70 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGC3Q9UN70 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGC3Q9UN70 AL355472.2-201ENST00000422958 438 ntBASIC21.51■■□□□ 1.03
PCDHGC3Q9UN70 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHGC3Q9UN70 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHGC3Q9UN70 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHGC3Q9UN70 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHGC3Q9UN70 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGC3Q9UN70 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGC3Q9UN70 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGC3Q9UN70 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGC3Q9UN70 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGC3Q9UN70 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHGC3Q9UN70 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHGC3Q9UN70 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGC3Q9UN70 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGC3Q9UN70 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGC3Q9UN70 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PCDHGC3Q9UN70 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
PCDHGC3Q9UN70 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGC3Q9UN70 AF201337.1-201ENST00000520239 748 ntBASIC21.5■■□□□ 1.03
PCDHGC3Q9UN70 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGC3Q9UN70 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
PCDHGC3Q9UN70 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHGC3Q9UN70 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.5■■□□□ 1.03
PCDHGC3Q9UN70 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHGC3Q9UN70 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGC3Q9UN70 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGC3Q9UN70 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGC3Q9UN70 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGC3Q9UN70 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGC3Q9UN70 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGC3Q9UN70 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHGC3Q9UN70 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHGC3Q9UN70 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PCDHGC3Q9UN70 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGC3Q9UN70 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGC3Q9UN70 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
PCDHGC3Q9UN70 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHGC3Q9UN70 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGC3Q9UN70 AC105036.2-201ENST00000569468 176 ntBASIC21.49■■□□□ 1.03
PCDHGC3Q9UN70 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGC3Q9UN70 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGC3Q9UN70 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGC3Q9UN70 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
PCDHGC3Q9UN70 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGC3Q9UN70 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
PCDHGC3Q9UN70 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGC3Q9UN70 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGC3Q9UN70 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PCDHGC3Q9UN70 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGC3Q9UN70 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGC3Q9UN70 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHGC3Q9UN70 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHGC3Q9UN70 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms