Protein–RNA interactions for Protein: Q9ULB5

CDH7, Cadherin-7, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH7Q9ULB5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH7Q9ULB5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.28■■□□□ 1
CDH7Q9ULB5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH7Q9ULB5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
CDH7Q9ULB5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CDH7Q9ULB5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.27■■□□□ 1
CDH7Q9ULB5 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CDH7Q9ULB5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.27■■□□□ 1
CDH7Q9ULB5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.27■■□□□ 1
CDH7Q9ULB5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.27■■□□□ 1
CDH7Q9ULB5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.27■■□□□ 1
CDH7Q9ULB5 AC006557.6-201ENST00000623071 864 ntBASIC21.27■■□□□ 1
CDH7Q9ULB5 AL049637.2-201ENST00000641778 930 ntBASIC21.27■■□□□ 1
CDH7Q9ULB5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.27■■□□□ 1
CDH7Q9ULB5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDH7Q9ULB5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDH7Q9ULB5 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDH7Q9ULB5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CDH7Q9ULB5 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.26■□□□□ 0.99
CDH7Q9ULB5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.26■□□□□ 0.99
CDH7Q9ULB5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH7Q9ULB5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH7Q9ULB5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH7Q9ULB5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CDH7Q9ULB5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDH7Q9ULB5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.26■□□□□ 0.99
CDH7Q9ULB5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
CDH7Q9ULB5 AC110285.5-201ENST00000611501 352 ntBASIC21.26■□□□□ 0.99
CDH7Q9ULB5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDH7Q9ULB5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.26■□□□□ 0.99
CDH7Q9ULB5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH7Q9ULB5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH7Q9ULB5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
CDH7Q9ULB5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH7Q9ULB5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDH7Q9ULB5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDH7Q9ULB5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH7Q9ULB5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH7Q9ULB5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.25■□□□□ 0.99
CDH7Q9ULB5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDH7Q9ULB5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH7Q9ULB5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH7Q9ULB5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH7Q9ULB5 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.25■□□□□ 0.99
CDH7Q9ULB5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.25■□□□□ 0.99
CDH7Q9ULB5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDH7Q9ULB5 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CDH7Q9ULB5 AL135905.2-201ENST00000584934 1404 ntBASIC21.25■□□□□ 0.99
CDH7Q9ULB5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CDH7Q9ULB5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CDH7Q9ULB5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH7Q9ULB5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.25■□□□□ 0.99
CDH7Q9ULB5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.25■□□□□ 0.99
CDH7Q9ULB5 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.25■□□□□ 0.99
CDH7Q9ULB5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.25■□□□□ 0.99
CDH7Q9ULB5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.25■□□□□ 0.99
CDH7Q9ULB5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDH7Q9ULB5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH7Q9ULB5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDH7Q9ULB5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH7Q9ULB5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH7Q9ULB5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH7Q9ULB5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDH7Q9ULB5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDH7Q9ULB5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CDH7Q9ULB5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDH7Q9ULB5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDH7Q9ULB5 KRASP1-201ENST00000407852 552 ntBASIC21.24■□□□□ 0.99
CDH7Q9ULB5 MIR1224-201ENST00000408193 85 ntBASIC21.24■□□□□ 0.99
CDH7Q9ULB5 AL390719.1-204ENST00000412397 1219 ntBASIC21.24■□□□□ 0.99
CDH7Q9ULB5 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.24■□□□□ 0.99
CDH7Q9ULB5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDH7Q9ULB5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH7Q9ULB5 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.24■□□□□ 0.99
CDH7Q9ULB5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH7Q9ULB5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH7Q9ULB5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.23■□□□□ 0.99
CDH7Q9ULB5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDH7Q9ULB5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CDH7Q9ULB5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDH7Q9ULB5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.23■□□□□ 0.99
CDH7Q9ULB5 AL356652.1-201ENST00000615962 565 ntBASIC21.23■□□□□ 0.99
CDH7Q9ULB5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH7Q9ULB5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH7Q9ULB5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH7Q9ULB5 AC007375.3-201ENST00000600936 2314 ntBASIC21.23■□□□□ 0.99
CDH7Q9ULB5 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDH7Q9ULB5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
CDH7Q9ULB5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDH7Q9ULB5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH7Q9ULB5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.23■□□□□ 0.99
CDH7Q9ULB5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH7Q9ULB5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH7Q9ULB5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH7Q9ULB5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH7Q9ULB5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.22■□□□□ 0.99
CDH7Q9ULB5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.22■□□□□ 0.99
CDH7Q9ULB5 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.22■□□□□ 0.99
CDH7Q9ULB5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.22■□□□□ 0.99
CDH7Q9ULB5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms