Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 AC005332.7-201ENST00000614046 2005 ntBASIC17.88■□□□□ 0.45
COMMD3Q9UBI1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD3Q9UBI1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 AC011484.1-201ENST00000377652 1995 ntBASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 MIR3181-201ENST00000578512 73 ntBASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 AC099791.2-201ENST00000605725 427 ntBASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD3Q9UBI1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.85■□□□□ 0.45
COMMD3Q9UBI1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD3Q9UBI1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD3Q9UBI1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD3Q9UBI1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD3Q9UBI1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms