Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.17■■□□□ 1.3
COL20A1Q9P218 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.17■■□□□ 1.3
COL20A1Q9P218 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
COL20A1Q9P218 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL20A1Q9P218 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.16■■□□□ 1.3
COL20A1Q9P218 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL20A1Q9P218 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL20A1Q9P218 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.16■■□□□ 1.3
COL20A1Q9P218 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL20A1Q9P218 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
COL20A1Q9P218 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL20A1Q9P218 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL20A1Q9P218 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
COL20A1Q9P218 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.16■■□□□ 1.3
COL20A1Q9P218 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL20A1Q9P218 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL20A1Q9P218 AC006557.6-201ENST00000623071 864 ntBASIC23.16■■□□□ 1.3
COL20A1Q9P218 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL20A1Q9P218 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.16■■□□□ 1.3
COL20A1Q9P218 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL20A1Q9P218 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL20A1Q9P218 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL20A1Q9P218 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL20A1Q9P218 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL20A1Q9P218 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL20A1Q9P218 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
COL20A1Q9P218 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL20A1Q9P218 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.15■■□□□ 1.3
COL20A1Q9P218 AC069544.1-201ENST00000609399 999 ntBASIC23.15■■□□□ 1.3
COL20A1Q9P218 AL359736.2-201ENST00000621992 437 ntBASIC23.15■■□□□ 1.3
COL20A1Q9P218 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL20A1Q9P218 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL20A1Q9P218 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL20A1Q9P218 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL20A1Q9P218 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL20A1Q9P218 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
COL20A1Q9P218 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC23.15■■□□□ 1.3
COL20A1Q9P218 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL20A1Q9P218 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL20A1Q9P218 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL20A1Q9P218 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
COL20A1Q9P218 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.14■■□□□ 1.29
COL20A1Q9P218 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
COL20A1Q9P218 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.14■■□□□ 1.29
COL20A1Q9P218 AC005829.2-201ENST00000571422 1056 ntBASIC23.14■■□□□ 1.29
COL20A1Q9P218 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
COL20A1Q9P218 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL20A1Q9P218 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL20A1Q9P218 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.13■■□□□ 1.29
COL20A1Q9P218 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
COL20A1Q9P218 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL20A1Q9P218 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL20A1Q9P218 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.13■■□□□ 1.29
COL20A1Q9P218 POM121L13P-201ENST00000422362 380 ntBASIC23.13■■□□□ 1.29
COL20A1Q9P218 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
COL20A1Q9P218 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL20A1Q9P218 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL20A1Q9P218 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
COL20A1Q9P218 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL20A1Q9P218 AL121603.2-201ENST00000557373 2117 ntBASIC23.12■■□□□ 1.29
COL20A1Q9P218 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.12■■□□□ 1.29
COL20A1Q9P218 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
COL20A1Q9P218 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.12■■□□□ 1.29
COL20A1Q9P218 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL20A1Q9P218 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL20A1Q9P218 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL20A1Q9P218 KRT17P3-201ENST00000420566 1262 ntBASIC23.12■■□□□ 1.29
COL20A1Q9P218 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL20A1Q9P218 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
COL20A1Q9P218 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL20A1Q9P218 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.12■■□□□ 1.29
COL20A1Q9P218 RN7SL471P-201ENST00000580476 299 ntBASIC23.12■■□□□ 1.29
COL20A1Q9P218 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
COL20A1Q9P218 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
COL20A1Q9P218 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL20A1Q9P218 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.12■■□□□ 1.29
COL20A1Q9P218 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
COL20A1Q9P218 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL20A1Q9P218 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.11■■□□□ 1.29
COL20A1Q9P218 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL20A1Q9P218 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL20A1Q9P218 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.11■■□□□ 1.29
COL20A1Q9P218 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL20A1Q9P218 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL20A1Q9P218 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.11■■□□□ 1.29
COL20A1Q9P218 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL20A1Q9P218 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL20A1Q9P218 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.1■■□□□ 1.29
COL20A1Q9P218 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL20A1Q9P218 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL20A1Q9P218 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL20A1Q9P218 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL20A1Q9P218 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.1■■□□□ 1.29
COL20A1Q9P218 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL20A1Q9P218 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.1■■□□□ 1.29
COL20A1Q9P218 RPPH1-201ENST00000516869 333 ntBASIC23.1■■□□□ 1.29
COL20A1Q9P218 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.1■■□□□ 1.29
COL20A1Q9P218 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.1■■□□□ 1.29
COL20A1Q9P218 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.1■■□□□ 1.29
COL20A1Q9P218 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms