Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDE1Q9NXR1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDE1Q9NXR1 SRD5A1P1-201ENST00000442297 786 ntBASIC19.66■□□□□ 0.74
NDE1Q9NXR1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.66■□□□□ 0.74
NDE1Q9NXR1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.66■□□□□ 0.74
NDE1Q9NXR1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NDE1Q9NXR1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.66■□□□□ 0.74
NDE1Q9NXR1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDE1Q9NXR1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.66■□□□□ 0.74
NDE1Q9NXR1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDE1Q9NXR1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDE1Q9NXR1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NDE1Q9NXR1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.66■□□□□ 0.74
NDE1Q9NXR1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NDE1Q9NXR1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDE1Q9NXR1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NDE1Q9NXR1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
NDE1Q9NXR1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NDE1Q9NXR1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NDE1Q9NXR1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.64■□□□□ 0.73
NDE1Q9NXR1 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.64■□□□□ 0.73
NDE1Q9NXR1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.64■□□□□ 0.73
NDE1Q9NXR1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.64■□□□□ 0.73
NDE1Q9NXR1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NDE1Q9NXR1 AC009237.3-201ENST00000393279 1427 ntBASIC19.64■□□□□ 0.73
NDE1Q9NXR1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NDE1Q9NXR1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.64■□□□□ 0.73
NDE1Q9NXR1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NDE1Q9NXR1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NDE1Q9NXR1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NDE1Q9NXR1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NDE1Q9NXR1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.64■□□□□ 0.73
NDE1Q9NXR1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.64■□□□□ 0.73
NDE1Q9NXR1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.63■□□□□ 0.73
NDE1Q9NXR1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.63■□□□□ 0.73
NDE1Q9NXR1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NDE1Q9NXR1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NDE1Q9NXR1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NDE1Q9NXR1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NDE1Q9NXR1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
NDE1Q9NXR1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.63■□□□□ 0.73
NDE1Q9NXR1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.63■□□□□ 0.73
NDE1Q9NXR1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NDE1Q9NXR1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.63■□□□□ 0.73
NDE1Q9NXR1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.63■□□□□ 0.73
NDE1Q9NXR1 SMUG1P1-201ENST00000590640 811 ntBASIC19.63■□□□□ 0.73
NDE1Q9NXR1 AL356740.2-201ENST00000601559 647 ntBASIC19.63■□□□□ 0.73
NDE1Q9NXR1 AL158211.5-201ENST00000623583 2518 ntBASIC19.63■□□□□ 0.73
NDE1Q9NXR1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.63■□□□□ 0.73
NDE1Q9NXR1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NDE1Q9NXR1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NDE1Q9NXR1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NDE1Q9NXR1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NDE1Q9NXR1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms