Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIN7CQ9NUP9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 NTF6G-201ENST00000591094 616 ntBASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 AC053503.5-201ENST00000601508 636 ntBASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIN7CQ9NUP9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 AL512408.1-201ENST00000569378 2000 ntBASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 KRT18P5-201ENST00000436075 1291 ntBASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 AL162430.1-201ENST00000480705 870 ntBASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 EEF1DP3-203ENST00000566025 782 ntBASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 AL162377.1-201ENST00000618844 1793 ntBASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LIN7CQ9NUP9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 KRT19P1-201ENST00000405746 1186 ntBASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 PCDHAC2-203ENST00000615316 3011 ntBASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIN7CQ9NUP9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms