Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
BLOC1S4Q9NUP1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
BLOC1S4Q9NUP1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.73■■□□□ 1.23
BLOC1S4Q9NUP1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
BLOC1S4Q9NUP1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
BLOC1S4Q9NUP1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
BLOC1S4Q9NUP1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
BLOC1S4Q9NUP1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
BLOC1S4Q9NUP1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
BLOC1S4Q9NUP1 AC073130.3-201ENST00000624389 2278 ntBASIC22.72■■□□□ 1.23
BLOC1S4Q9NUP1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.72■■□□□ 1.23
BLOC1S4Q9NUP1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22.72■■□□□ 1.23
BLOC1S4Q9NUP1 CYP2T3P-201ENST00000601990 817 ntBASIC22.72■■□□□ 1.23
BLOC1S4Q9NUP1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
BLOC1S4Q9NUP1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
BLOC1S4Q9NUP1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.72■■□□□ 1.23
BLOC1S4Q9NUP1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
BLOC1S4Q9NUP1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
BLOC1S4Q9NUP1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
BLOC1S4Q9NUP1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
BLOC1S4Q9NUP1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
BLOC1S4Q9NUP1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.71■■□□□ 1.23
BLOC1S4Q9NUP1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
BLOC1S4Q9NUP1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.71■■□□□ 1.23
BLOC1S4Q9NUP1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.71■■□□□ 1.23
BLOC1S4Q9NUP1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
BLOC1S4Q9NUP1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
BLOC1S4Q9NUP1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
BLOC1S4Q9NUP1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.71■■□□□ 1.23
BLOC1S4Q9NUP1 AC008694.1-202ENST00000636953 945 ntBASIC22.71■■□□□ 1.23
BLOC1S4Q9NUP1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
BLOC1S4Q9NUP1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
BLOC1S4Q9NUP1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
BLOC1S4Q9NUP1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
BLOC1S4Q9NUP1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
BLOC1S4Q9NUP1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
BLOC1S4Q9NUP1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.7■■□□□ 1.22
BLOC1S4Q9NUP1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.7■■□□□ 1.22
BLOC1S4Q9NUP1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.7■■□□□ 1.22
BLOC1S4Q9NUP1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
BLOC1S4Q9NUP1 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.7■■□□□ 1.22
BLOC1S4Q9NUP1 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.7■■□□□ 1.22
BLOC1S4Q9NUP1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.7■■□□□ 1.22
BLOC1S4Q9NUP1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
BLOC1S4Q9NUP1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.7■■□□□ 1.22
BLOC1S4Q9NUP1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.7■■□□□ 1.22
BLOC1S4Q9NUP1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
BLOC1S4Q9NUP1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
BLOC1S4Q9NUP1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.7■■□□□ 1.22
BLOC1S4Q9NUP1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
BLOC1S4Q9NUP1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
BLOC1S4Q9NUP1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
BLOC1S4Q9NUP1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
BLOC1S4Q9NUP1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
BLOC1S4Q9NUP1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.69■■□□□ 1.22
BLOC1S4Q9NUP1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
BLOC1S4Q9NUP1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.69■■□□□ 1.22
BLOC1S4Q9NUP1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
BLOC1S4Q9NUP1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
BLOC1S4Q9NUP1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
BLOC1S4Q9NUP1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 KRT18P68-201ENST00000392293 1000 ntBASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
BLOC1S4Q9NUP1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
BLOC1S4Q9NUP1 KRT17P1-201ENST00000399211 1546 ntBASIC22.67■■□□□ 1.22
BLOC1S4Q9NUP1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BLOC1S4Q9NUP1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BLOC1S4Q9NUP1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.67■■□□□ 1.22
BLOC1S4Q9NUP1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
BLOC1S4Q9NUP1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.67■■□□□ 1.22
BLOC1S4Q9NUP1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
BLOC1S4Q9NUP1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BLOC1S4Q9NUP1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BLOC1S4Q9NUP1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.67■■□□□ 1.22
BLOC1S4Q9NUP1 PGM5P4-201ENST00000421970 445 ntBASIC22.67■■□□□ 1.22
BLOC1S4Q9NUP1 AC105020.6-201ENST00000621523 1217 ntBASIC22.67■■□□□ 1.22
BLOC1S4Q9NUP1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC22.67■■□□□ 1.22
BLOC1S4Q9NUP1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
BLOC1S4Q9NUP1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
BLOC1S4Q9NUP1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BLOC1S4Q9NUP1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms