Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CCM2LQ9NUG4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCM2LQ9NUG4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CCM2LQ9NUG4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCM2LQ9NUG4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCM2LQ9NUG4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
CCM2LQ9NUG4 AL358852.1-201ENST00000623174 1268 ntBASIC19.33■□□□□ 0.68
CCM2LQ9NUG4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCM2LQ9NUG4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.33■□□□□ 0.68
CCM2LQ9NUG4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.33■□□□□ 0.68
CCM2LQ9NUG4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCM2LQ9NUG4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCM2LQ9NUG4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCM2LQ9NUG4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCM2LQ9NUG4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 AC125437.2-201ENST00000625180 2167 ntBASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 AC027612.3-201ENST00000413684 1047 ntBASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 MIR6084-201ENST00000622012 110 ntBASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCM2LQ9NUG4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 NTF6G-201ENST00000591094 616 ntBASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2LQ9NUG4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 AC092720.2-201ENST00000602388 1665 ntBASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2LQ9NUG4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCM2LQ9NUG4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.29■□□□□ 0.68
CCM2LQ9NUG4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.29■□□□□ 0.68
CCM2LQ9NUG4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CCM2LQ9NUG4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCM2LQ9NUG4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCM2LQ9NUG4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCM2LQ9NUG4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.29■□□□□ 0.68
CCM2LQ9NUG4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.29■□□□□ 0.68
CCM2LQ9NUG4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.29■□□□□ 0.68
CCM2LQ9NUG4 CCDC92B-201ENST00000575506 885 ntBASIC19.29■□□□□ 0.68
CCM2LQ9NUG4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
CCM2LQ9NUG4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCM2LQ9NUG4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCM2LQ9NUG4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCM2LQ9NUG4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms