Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZCCHC3Q9NUD5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZCCHC3Q9NUD5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.12■□□□□ 0.65
ZCCHC3Q9NUD5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.12■□□□□ 0.65
ZCCHC3Q9NUD5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZCCHC3Q9NUD5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZCCHC3Q9NUD5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ZCCHC3Q9NUD5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.12■□□□□ 0.65
ZCCHC3Q9NUD5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZCCHC3Q9NUD5 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.12■□□□□ 0.65
ZCCHC3Q9NUD5 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.12■□□□□ 0.65
ZCCHC3Q9NUD5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.12■□□□□ 0.65
ZCCHC3Q9NUD5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.12■□□□□ 0.65
ZCCHC3Q9NUD5 AC016769.1-201ENST00000409132 1010 ntBASIC19.12■□□□□ 0.65
ZCCHC3Q9NUD5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.12■□□□□ 0.65
ZCCHC3Q9NUD5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZCCHC3Q9NUD5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
ZCCHC3Q9NUD5 AL512408.1-201ENST00000569378 2000 ntBASIC19.12■□□□□ 0.65
ZCCHC3Q9NUD5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
ZCCHC3Q9NUD5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.11■□□□□ 0.65
ZCCHC3Q9NUD5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
ZCCHC3Q9NUD5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ZCCHC3Q9NUD5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.11■□□□□ 0.65
ZCCHC3Q9NUD5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.11■□□□□ 0.65
ZCCHC3Q9NUD5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.11■□□□□ 0.65
ZCCHC3Q9NUD5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
ZCCHC3Q9NUD5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.11■□□□□ 0.65
ZCCHC3Q9NUD5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ZCCHC3Q9NUD5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.11■□□□□ 0.65
ZCCHC3Q9NUD5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.11■□□□□ 0.65
ZCCHC3Q9NUD5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.11■□□□□ 0.65
ZCCHC3Q9NUD5 FAM21FP-204ENST00000608637 956 ntBASIC19.11■□□□□ 0.65
ZCCHC3Q9NUD5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.11■□□□□ 0.65
ZCCHC3Q9NUD5 AL391422.3-201ENST00000603791 2761 ntBASIC19.11■□□□□ 0.65
ZCCHC3Q9NUD5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZCCHC3Q9NUD5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.11■□□□□ 0.65
ZCCHC3Q9NUD5 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ZCCHC3Q9NUD5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 AL591742.1-201ENST00000604433 565 ntBASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.09■□□□□ 0.65
ZCCHC3Q9NUD5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms