Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42SE2Q9NRR3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42SE2Q9NRR3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42SE2Q9NRR3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC42SE2Q9NRR3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 SMG8-203ENST00000578922 2178 ntBASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14□□□□□ -0.17
CDC42SE2Q9NRR3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 AL031432.3-201ENST00000607698 485 ntBASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
CDC42SE2Q9NRR3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 AC110285.6-201ENST00000617652 491 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms