Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
HPS4Q9NQG7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HPS4Q9NQG7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.09■□□□□ 0.97
HPS4Q9NQG7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
HPS4Q9NQG7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HPS4Q9NQG7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HPS4Q9NQG7 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.09■□□□□ 0.97
HPS4Q9NQG7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.09■□□□□ 0.97
HPS4Q9NQG7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.09■□□□□ 0.97
HPS4Q9NQG7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HPS4Q9NQG7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.09■□□□□ 0.97
HPS4Q9NQG7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HPS4Q9NQG7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HPS4Q9NQG7 POM121L13P-201ENST00000422362 380 ntBASIC21.09■□□□□ 0.97
HPS4Q9NQG7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.09■□□□□ 0.97
HPS4Q9NQG7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
HPS4Q9NQG7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HPS4Q9NQG7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.09■□□□□ 0.97
HPS4Q9NQG7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.09■□□□□ 0.97
HPS4Q9NQG7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
HPS4Q9NQG7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
HPS4Q9NQG7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.09■□□□□ 0.97
HPS4Q9NQG7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HPS4Q9NQG7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.08■□□□□ 0.97
HPS4Q9NQG7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HPS4Q9NQG7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HPS4Q9NQG7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HPS4Q9NQG7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HPS4Q9NQG7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.08■□□□□ 0.97
HPS4Q9NQG7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
HPS4Q9NQG7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
HPS4Q9NQG7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.08■□□□□ 0.96
HPS4Q9NQG7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.07■□□□□ 0.96
HPS4Q9NQG7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HPS4Q9NQG7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.07■□□□□ 0.96
HPS4Q9NQG7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HPS4Q9NQG7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HPS4Q9NQG7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HPS4Q9NQG7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HPS4Q9NQG7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HPS4Q9NQG7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HPS4Q9NQG7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.07■□□□□ 0.96
HPS4Q9NQG7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HPS4Q9NQG7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.07■□□□□ 0.96
HPS4Q9NQG7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.07■□□□□ 0.96
HPS4Q9NQG7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.07■□□□□ 0.96
HPS4Q9NQG7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HPS4Q9NQG7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
HPS4Q9NQG7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.07■□□□□ 0.96
HPS4Q9NQG7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HPS4Q9NQG7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HPS4Q9NQG7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HPS4Q9NQG7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.06■□□□□ 0.96
HPS4Q9NQG7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HPS4Q9NQG7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
HPS4Q9NQG7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HPS4Q9NQG7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.06■□□□□ 0.96
HPS4Q9NQG7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
HPS4Q9NQG7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.06■□□□□ 0.96
HPS4Q9NQG7 Z99916.2-201ENST00000604037 246 ntBASIC21.06■□□□□ 0.96
HPS4Q9NQG7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HPS4Q9NQG7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HPS4Q9NQG7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.06■□□□□ 0.96
HPS4Q9NQG7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HPS4Q9NQG7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HPS4Q9NQG7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HPS4Q9NQG7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.05■□□□□ 0.96
HPS4Q9NQG7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
HPS4Q9NQG7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.04■□□□□ 0.96
HPS4Q9NQG7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HPS4Q9NQG7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HPS4Q9NQG7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HPS4Q9NQG7 AC007375.3-201ENST00000600936 2314 ntBASIC21.04■□□□□ 0.96
HPS4Q9NQG7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HPS4Q9NQG7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
HPS4Q9NQG7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HPS4Q9NQG7 MIR718-201ENST00000390190 70 ntBASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms