Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 DUX4L5-201ENST00000630834 1275 ntBASIC18.37■□□□□ 0.53
HINT3Q9NQE9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.37■□□□□ 0.53
HINT3Q9NQE9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HINT3Q9NQE9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HINT3Q9NQE9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HINT3Q9NQE9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.36■□□□□ 0.53
HINT3Q9NQE9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.36■□□□□ 0.53
HINT3Q9NQE9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HINT3Q9NQE9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HINT3Q9NQE9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HINT3Q9NQE9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HINT3Q9NQE9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HINT3Q9NQE9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HINT3Q9NQE9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.36■□□□□ 0.53
HINT3Q9NQE9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.36■□□□□ 0.53
HINT3Q9NQE9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.36■□□□□ 0.53
HINT3Q9NQE9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HINT3Q9NQE9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HINT3Q9NQE9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
HINT3Q9NQE9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HINT3Q9NQE9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HINT3Q9NQE9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HINT3Q9NQE9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HINT3Q9NQE9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.35■□□□□ 0.53
HINT3Q9NQE9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HINT3Q9NQE9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HINT3Q9NQE9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HINT3Q9NQE9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HINT3Q9NQE9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.35■□□□□ 0.53
HINT3Q9NQE9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.35■□□□□ 0.53
HINT3Q9NQE9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.35■□□□□ 0.53
HINT3Q9NQE9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.35■□□□□ 0.53
HINT3Q9NQE9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HINT3Q9NQE9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HINT3Q9NQE9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HINT3Q9NQE9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HINT3Q9NQE9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.34■□□□□ 0.53
HINT3Q9NQE9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
HINT3Q9NQE9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HINT3Q9NQE9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.34■□□□□ 0.53
HINT3Q9NQE9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HINT3Q9NQE9 KRT87P-202ENST00000534226 1464 ntBASIC18.34■□□□□ 0.53
HINT3Q9NQE9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.34■□□□□ 0.53
HINT3Q9NQE9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HINT3Q9NQE9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.34■□□□□ 0.53
HINT3Q9NQE9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.34■□□□□ 0.53
HINT3Q9NQE9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
HINT3Q9NQE9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HINT3Q9NQE9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HINT3Q9NQE9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.34■□□□□ 0.53
HINT3Q9NQE9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.34■□□□□ 0.53
HINT3Q9NQE9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HINT3Q9NQE9 AC245052.3-201ENST00000450182 901 ntBASIC18.34■□□□□ 0.53
HINT3Q9NQE9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HINT3Q9NQE9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HINT3Q9NQE9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HINT3Q9NQE9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HINT3Q9NQE9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HINT3Q9NQE9 KRT16P2-201ENST00000414673 1423 ntBASIC18.33■□□□□ 0.53
HINT3Q9NQE9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HINT3Q9NQE9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HINT3Q9NQE9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HINT3Q9NQE9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HINT3Q9NQE9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HINT3Q9NQE9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HINT3Q9NQE9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HINT3Q9NQE9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HINT3Q9NQE9 AC079140.4-201ENST00000507448 529 ntBASIC18.33■□□□□ 0.52
HINT3Q9NQE9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.33■□□□□ 0.52
HINT3Q9NQE9 AC138907.5-202ENST00000569484 235 ntBASIC18.33■□□□□ 0.52
HINT3Q9NQE9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.33■□□□□ 0.52
HINT3Q9NQE9 MIR2861-201ENST00000636310 90 ntBASIC18.33■□□□□ 0.52
HINT3Q9NQE9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HINT3Q9NQE9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.33■□□□□ 0.52
HINT3Q9NQE9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HINT3Q9NQE9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HINT3Q9NQE9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.33■□□□□ 0.52
HINT3Q9NQE9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HINT3Q9NQE9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HINT3Q9NQE9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HINT3Q9NQE9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
HINT3Q9NQE9 SMG8-203ENST00000578922 2178 ntBASIC18.32■□□□□ 0.52
HINT3Q9NQE9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HINT3Q9NQE9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HINT3Q9NQE9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.32■□□□□ 0.52
HINT3Q9NQE9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms