Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.29■■□□□ 1
CD248Q9HCU0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CD248Q9HCU0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.29■■□□□ 1
CD248Q9HCU0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.29■■□□□ 1
CD248Q9HCU0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.29■■□□□ 1
CD248Q9HCU0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CD248Q9HCU0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CD248Q9HCU0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.29■■□□□ 1
CD248Q9HCU0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CD248Q9HCU0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.29■■□□□ 1
CD248Q9HCU0 AC243732.1-201ENST00000612648 864 ntBASIC21.29■■□□□ 1
CD248Q9HCU0 MYC-209ENST00000641252 345 ntBASIC21.29■■□□□ 1
CD248Q9HCU0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CD248Q9HCU0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.29■■□□□ 1
CD248Q9HCU0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CD248Q9HCU0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CD248Q9HCU0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.29■■□□□ 1
CD248Q9HCU0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CD248Q9HCU0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.29■■□□□ 1
CD248Q9HCU0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CD248Q9HCU0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CD248Q9HCU0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.28■■□□□ 1
CD248Q9HCU0 AC003102.1-202ENST00000563394 1796 ntBASIC21.28■■□□□ 1
CD248Q9HCU0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.28■■□□□ 1
CD248Q9HCU0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.28■■□□□ 1
CD248Q9HCU0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.28■■□□□ 1
CD248Q9HCU0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CD248Q9HCU0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CD248Q9HCU0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CD248Q9HCU0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CD248Q9HCU0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.28■■□□□ 1
CD248Q9HCU0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
CD248Q9HCU0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.28■■□□□ 1
CD248Q9HCU0 AC069236.1-201ENST00000604339 616 ntBASIC21.28■■□□□ 1
CD248Q9HCU0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.28■■□□□ 1
CD248Q9HCU0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
CD248Q9HCU0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.28■■□□□ 1
CD248Q9HCU0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CD248Q9HCU0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.28■■□□□ 1
CD248Q9HCU0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.28■■□□□ 1
CD248Q9HCU0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CD248Q9HCU0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CD248Q9HCU0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.28■■□□□ 1
CD248Q9HCU0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD248Q9HCU0 AC061975.6-201ENST00000579045 1553 ntBASIC21.27■■□□□ 1
CD248Q9HCU0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.27■■□□□ 1
CD248Q9HCU0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.27■■□□□ 1
CD248Q9HCU0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
CD248Q9HCU0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD248Q9HCU0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.27■■□□□ 1
CD248Q9HCU0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD248Q9HCU0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.27■■□□□ 1
CD248Q9HCU0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CD248Q9HCU0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CD248Q9HCU0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.27■■□□□ 1
CD248Q9HCU0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD248Q9HCU0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.27■■□□□ 1
CD248Q9HCU0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.27■■□□□ 1
CD248Q9HCU0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.27■■□□□ 1
CD248Q9HCU0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.27■■□□□ 1
CD248Q9HCU0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
CD248Q9HCU0 AC120498.10-201ENST00000621827 505 ntBASIC21.27■■□□□ 1
CD248Q9HCU0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.27■■□□□ 1
CD248Q9HCU0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.27■■□□□ 1
CD248Q9HCU0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.27■■□□□ 1
CD248Q9HCU0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.27■■□□□ 1
CD248Q9HCU0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.27■■□□□ 1
CD248Q9HCU0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
CD248Q9HCU0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
CD248Q9HCU0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CD248Q9HCU0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CD248Q9HCU0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.27■□□□□ 0.99
CD248Q9HCU0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
CD248Q9HCU0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.26■□□□□ 0.99
CD248Q9HCU0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CD248Q9HCU0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CD248Q9HCU0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.26■□□□□ 0.99
CD248Q9HCU0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD248Q9HCU0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.26■□□□□ 0.99
CD248Q9HCU0 AC083880.1-201ENST00000608266 535 ntBASIC21.26■□□□□ 0.99
CD248Q9HCU0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CD248Q9HCU0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD248Q9HCU0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD248Q9HCU0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CD248Q9HCU0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CD248Q9HCU0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.26■□□□□ 0.99
CD248Q9HCU0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.25■□□□□ 0.99
CD248Q9HCU0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CD248Q9HCU0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.25■□□□□ 0.99
CD248Q9HCU0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.25■□□□□ 0.99
CD248Q9HCU0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CD248Q9HCU0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD248Q9HCU0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CD248Q9HCU0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.25■□□□□ 0.99
CD248Q9HCU0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CD248Q9HCU0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.25■□□□□ 0.99
CD248Q9HCU0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CD248Q9HCU0 AC008694.1-202ENST00000636953 945 ntBASIC21.25■□□□□ 0.99
CD248Q9HCU0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CD248Q9HCU0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms