Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF556Q9HAH1 AC105233.4-201ENST00000642045 216 ntBASIC18.81■□□□□ 0.6
ZNF556Q9HAH1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF556Q9HAH1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF556Q9HAH1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF556Q9HAH1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ZNF556Q9HAH1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF556Q9HAH1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF556Q9HAH1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF556Q9HAH1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF556Q9HAH1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
ZNF556Q9HAH1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF556Q9HAH1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF556Q9HAH1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF556Q9HAH1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF556Q9HAH1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF556Q9HAH1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.8■□□□□ 0.6
ZNF556Q9HAH1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF556Q9HAH1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ZNF556Q9HAH1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF556Q9HAH1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF556Q9HAH1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.8■□□□□ 0.6
ZNF556Q9HAH1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF556Q9HAH1 MIR4767-201ENST00000582827 78 ntBASIC18.8■□□□□ 0.6
ZNF556Q9HAH1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ZNF556Q9HAH1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNF556Q9HAH1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF556Q9HAH1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF556Q9HAH1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF556Q9HAH1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF556Q9HAH1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF556Q9HAH1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 AL356441.2-201ENST00000443009 864 ntBASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 AC053503.5-201ENST00000601508 636 ntBASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 SMG8-203ENST00000578922 2178 ntBASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF556Q9HAH1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF556Q9HAH1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF556Q9HAH1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNF556Q9HAH1 TCF3P1-201ENST00000423021 1937 ntBASIC18.78■□□□□ 0.6
ZNF556Q9HAH1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF556Q9HAH1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF556Q9HAH1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF556Q9HAH1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.78■□□□□ 0.6
ZNF556Q9HAH1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNF556Q9HAH1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNF556Q9HAH1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF556Q9HAH1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF556Q9HAH1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF556Q9HAH1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF556Q9HAH1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
ZNF556Q9HAH1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF556Q9HAH1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF556Q9HAH1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF556Q9HAH1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF556Q9HAH1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF556Q9HAH1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF556Q9HAH1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.77■□□□□ 0.6
ZNF556Q9HAH1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF556Q9HAH1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF556Q9HAH1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.77■□□□□ 0.6
ZNF556Q9HAH1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF556Q9HAH1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF556Q9HAH1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.77■□□□□ 0.6
ZNF556Q9HAH1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF556Q9HAH1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF556Q9HAH1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.77■□□□□ 0.6
ZNF556Q9HAH1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.77■□□□□ 0.59
ZNF556Q9HAH1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ZNF556Q9HAH1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ZNF556Q9HAH1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
ZNF556Q9HAH1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms