Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AL691432.2-201ENST00000607222 2038 ntBASIC20.87■□□□□ 0.93
VIPAS39Q9H9C1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VIPAS39Q9H9C1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
VIPAS39Q9H9C1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VIPAS39Q9H9C1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.86■□□□□ 0.93
VIPAS39Q9H9C1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.86■□□□□ 0.93
VIPAS39Q9H9C1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VIPAS39Q9H9C1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.86■□□□□ 0.93
VIPAS39Q9H9C1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VIPAS39Q9H9C1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
VIPAS39Q9H9C1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
VIPAS39Q9H9C1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.86■□□□□ 0.93
VIPAS39Q9H9C1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
VIPAS39Q9H9C1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.86■□□□□ 0.93
VIPAS39Q9H9C1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VIPAS39Q9H9C1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VIPAS39Q9H9C1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VIPAS39Q9H9C1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
VIPAS39Q9H9C1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VIPAS39Q9H9C1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
VIPAS39Q9H9C1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VIPAS39Q9H9C1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
VIPAS39Q9H9C1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.85■□□□□ 0.93
VIPAS39Q9H9C1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
VIPAS39Q9H9C1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VIPAS39Q9H9C1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VIPAS39Q9H9C1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.85■□□□□ 0.93
VIPAS39Q9H9C1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.85■□□□□ 0.93
VIPAS39Q9H9C1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.85■□□□□ 0.93
VIPAS39Q9H9C1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VIPAS39Q9H9C1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VIPAS39Q9H9C1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
VIPAS39Q9H9C1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
VIPAS39Q9H9C1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
VIPAS39Q9H9C1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VIPAS39Q9H9C1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
VIPAS39Q9H9C1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VIPAS39Q9H9C1 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.84■□□□□ 0.93
VIPAS39Q9H9C1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.84■□□□□ 0.93
VIPAS39Q9H9C1 AC079598.2-202ENST00000546624 1451 ntBASIC20.84■□□□□ 0.93
VIPAS39Q9H9C1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.84■□□□□ 0.93
VIPAS39Q9H9C1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VIPAS39Q9H9C1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
VIPAS39Q9H9C1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
VIPAS39Q9H9C1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.84■□□□□ 0.93
VIPAS39Q9H9C1 MIR3181-201ENST00000578512 73 ntBASIC20.84■□□□□ 0.93
VIPAS39Q9H9C1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
VIPAS39Q9H9C1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VIPAS39Q9H9C1 AL049812.1-201ENST00000432563 2267 ntBASIC20.84■□□□□ 0.93
VIPAS39Q9H9C1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
VIPAS39Q9H9C1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VIPAS39Q9H9C1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
VIPAS39Q9H9C1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VIPAS39Q9H9C1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
VIPAS39Q9H9C1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VIPAS39Q9H9C1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.83■□□□□ 0.93
VIPAS39Q9H9C1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VIPAS39Q9H9C1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.83■□□□□ 0.93
VIPAS39Q9H9C1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.83■□□□□ 0.93
VIPAS39Q9H9C1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VIPAS39Q9H9C1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VIPAS39Q9H9C1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VIPAS39Q9H9C1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VIPAS39Q9H9C1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
VIPAS39Q9H9C1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.83■□□□□ 0.93
VIPAS39Q9H9C1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.83■□□□□ 0.93
VIPAS39Q9H9C1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.83■□□□□ 0.93
VIPAS39Q9H9C1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VIPAS39Q9H9C1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.83■□□□□ 0.92
VIPAS39Q9H9C1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
VIPAS39Q9H9C1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.83■□□□□ 0.92
VIPAS39Q9H9C1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.92
VIPAS39Q9H9C1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 NTF6A-201ENST00000591175 560 ntBASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 AL031848.2-201ENST00000607670 837 ntBASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.82■□□□□ 0.92
VIPAS39Q9H9C1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VIPAS39Q9H9C1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VIPAS39Q9H9C1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VIPAS39Q9H9C1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
VIPAS39Q9H9C1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VIPAS39Q9H9C1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms