Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NSUN3Q9H649 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
NSUN3Q9H649 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
NSUN3Q9H649 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NSUN3Q9H649 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.66■■□□□ 1.06
NSUN3Q9H649 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.66■■□□□ 1.06
NSUN3Q9H649 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.66■■□□□ 1.06
NSUN3Q9H649 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.65■■□□□ 1.06
NSUN3Q9H649 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NSUN3Q9H649 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NSUN3Q9H649 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NSUN3Q9H649 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NSUN3Q9H649 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NSUN3Q9H649 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NSUN3Q9H649 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NSUN3Q9H649 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NSUN3Q9H649 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NSUN3Q9H649 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.65■■□□□ 1.06
NSUN3Q9H649 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
NSUN3Q9H649 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.65■■□□□ 1.06
NSUN3Q9H649 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NSUN3Q9H649 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NSUN3Q9H649 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NSUN3Q9H649 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NSUN3Q9H649 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.65■■□□□ 1.06
NSUN3Q9H649 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NSUN3Q9H649 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NSUN3Q9H649 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NSUN3Q9H649 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.65■■□□□ 1.06
NSUN3Q9H649 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
NSUN3Q9H649 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NSUN3Q9H649 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NSUN3Q9H649 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NSUN3Q9H649 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NSUN3Q9H649 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.64■■□□□ 1.06
NSUN3Q9H649 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NSUN3Q9H649 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NSUN3Q9H649 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NSUN3Q9H649 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NSUN3Q9H649 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
NSUN3Q9H649 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NSUN3Q9H649 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NSUN3Q9H649 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.64■■□□□ 1.05
NSUN3Q9H649 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.64■■□□□ 1.05
NSUN3Q9H649 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.64■■□□□ 1.05
NSUN3Q9H649 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NSUN3Q9H649 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.64■■□□□ 1.05
NSUN3Q9H649 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NSUN3Q9H649 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NSUN3Q9H649 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NSUN3Q9H649 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NSUN3Q9H649 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NSUN3Q9H649 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.63■■□□□ 1.05
NSUN3Q9H649 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.63■■□□□ 1.05
NSUN3Q9H649 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.63■■□□□ 1.05
NSUN3Q9H649 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.63■■□□□ 1.05
NSUN3Q9H649 AF186192.3-201ENST00000583427 947 ntBASIC21.63■■□□□ 1.05
NSUN3Q9H649 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.63■■□□□ 1.05
NSUN3Q9H649 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NSUN3Q9H649 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NSUN3Q9H649 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NSUN3Q9H649 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NSUN3Q9H649 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NSUN3Q9H649 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NSUN3Q9H649 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
NSUN3Q9H649 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NSUN3Q9H649 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.62■■□□□ 1.05
NSUN3Q9H649 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NSUN3Q9H649 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.62■■□□□ 1.05
NSUN3Q9H649 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.62■■□□□ 1.05
NSUN3Q9H649 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.62■■□□□ 1.05
NSUN3Q9H649 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NSUN3Q9H649 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.62■■□□□ 1.05
NSUN3Q9H649 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NSUN3Q9H649 AC145285.6-201ENST00000604632 637 ntBASIC21.62■■□□□ 1.05
NSUN3Q9H649 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.62■■□□□ 1.05
NSUN3Q9H649 AC005363.2-201ENST00000618631 242 ntBASIC21.62■■□□□ 1.05
NSUN3Q9H649 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.62■■□□□ 1.05
NSUN3Q9H649 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NSUN3Q9H649 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NSUN3Q9H649 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
NSUN3Q9H649 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
NSUN3Q9H649 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.62■■□□□ 1.05
NSUN3Q9H649 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NSUN3Q9H649 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NSUN3Q9H649 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
NSUN3Q9H649 HTR7P1-201ENST00000538670 1336 ntBASIC21.61■■□□□ 1.05
NSUN3Q9H649 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NSUN3Q9H649 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
NSUN3Q9H649 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
NSUN3Q9H649 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
NSUN3Q9H649 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.61■■□□□ 1.05
NSUN3Q9H649 AL353807.1-201ENST00000427475 662 ntBASIC21.61■■□□□ 1.05
NSUN3Q9H649 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.61■■□□□ 1.05
NSUN3Q9H649 MIR6786-201ENST00000616843 113 ntBASIC21.61■■□□□ 1.05
NSUN3Q9H649 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NSUN3Q9H649 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NSUN3Q9H649 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NSUN3Q9H649 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.61■■□□□ 1.05
NSUN3Q9H649 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms