Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.72■□□□□ 0.91
CDC42EP4Q9H3Q1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.72■□□□□ 0.91
CDC42EP4Q9H3Q1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42EP4Q9H3Q1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CDC42EP4Q9H3Q1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42EP4Q9H3Q1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.72■□□□□ 0.91
CDC42EP4Q9H3Q1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.72■□□□□ 0.91
CDC42EP4Q9H3Q1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42EP4Q9H3Q1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42EP4Q9H3Q1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CDC42EP4Q9H3Q1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC42EP4Q9H3Q1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.71■□□□□ 0.91
CDC42EP4Q9H3Q1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.71■□□□□ 0.91
CDC42EP4Q9H3Q1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC42EP4Q9H3Q1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC42EP4Q9H3Q1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC42EP4Q9H3Q1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.71■□□□□ 0.91
CDC42EP4Q9H3Q1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.71■□□□□ 0.91
CDC42EP4Q9H3Q1 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.71■□□□□ 0.91
CDC42EP4Q9H3Q1 BX323043.1-201ENST00000641006 1765 ntBASIC20.71■□□□□ 0.91
CDC42EP4Q9H3Q1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC42EP4Q9H3Q1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDC42EP4Q9H3Q1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
CDC42EP4Q9H3Q1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CDC42EP4Q9H3Q1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42EP4Q9H3Q1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42EP4Q9H3Q1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42EP4Q9H3Q1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42EP4Q9H3Q1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.7■□□□□ 0.9
CDC42EP4Q9H3Q1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CDC42EP4Q9H3Q1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.7■□□□□ 0.9
CDC42EP4Q9H3Q1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.7■□□□□ 0.9
CDC42EP4Q9H3Q1 AC012414.1-201ENST00000556676 535 ntBASIC20.7■□□□□ 0.9
CDC42EP4Q9H3Q1 TPRG1LP1-201ENST00000598702 760 ntBASIC20.7■□□□□ 0.9
CDC42EP4Q9H3Q1 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.7■□□□□ 0.9
CDC42EP4Q9H3Q1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.7■□□□□ 0.9
CDC42EP4Q9H3Q1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.7■□□□□ 0.9
CDC42EP4Q9H3Q1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42EP4Q9H3Q1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.7■□□□□ 0.9
CDC42EP4Q9H3Q1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42EP4Q9H3Q1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42EP4Q9H3Q1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 AC245052.3-201ENST00000450182 901 ntBASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 AP001330.3-201ENST00000520123 633 ntBASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDC42EP4Q9H3Q1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42EP4Q9H3Q1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CDC42EP4Q9H3Q1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42EP4Q9H3Q1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42EP4Q9H3Q1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42EP4Q9H3Q1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.68■□□□□ 0.9
CDC42EP4Q9H3Q1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42EP4Q9H3Q1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42EP4Q9H3Q1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42EP4Q9H3Q1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42EP4Q9H3Q1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42EP4Q9H3Q1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42EP4Q9H3Q1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDC42EP4Q9H3Q1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CDC42EP4Q9H3Q1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42EP4Q9H3Q1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.67■□□□□ 0.9
CDC42EP4Q9H3Q1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CDC42EP4Q9H3Q1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
CDC42EP4Q9H3Q1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.67■□□□□ 0.9
CDC42EP4Q9H3Q1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42EP4Q9H3Q1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42EP4Q9H3Q1 KRT16P2-201ENST00000414673 1423 ntBASIC20.67■□□□□ 0.9
CDC42EP4Q9H3Q1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42EP4Q9H3Q1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42EP4Q9H3Q1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42EP4Q9H3Q1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42EP4Q9H3Q1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CDC42EP4Q9H3Q1 AC116050.2-201ENST00000612102 1779 ntBASIC20.67■□□□□ 0.9
CDC42EP4Q9H3Q1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CDC42EP4Q9H3Q1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.67■□□□□ 0.9
CDC42EP4Q9H3Q1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.66■□□□□ 0.9
CDC42EP4Q9H3Q1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP4Q9H3Q1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP4Q9H3Q1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CDC42EP4Q9H3Q1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP4Q9H3Q1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms