Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.12■□□□□ 0.49
NELFAQ9H3P2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
NELFAQ9H3P2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NELFAQ9H3P2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.11■□□□□ 0.49
NELFAQ9H3P2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
NELFAQ9H3P2 AC007322.3-201ENST00000426526 701 ntBASIC18.11■□□□□ 0.49
NELFAQ9H3P2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NELFAQ9H3P2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.11■□□□□ 0.49
NELFAQ9H3P2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.11■□□□□ 0.49
NELFAQ9H3P2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.11■□□□□ 0.49
NELFAQ9H3P2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.11■□□□□ 0.49
NELFAQ9H3P2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NELFAQ9H3P2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.11■□□□□ 0.49
NELFAQ9H3P2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NELFAQ9H3P2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.11■□□□□ 0.49
NELFAQ9H3P2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NELFAQ9H3P2 FEM1AP1-201ENST00000431297 1995 ntBASIC18.11■□□□□ 0.49
NELFAQ9H3P2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NELFAQ9H3P2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NELFAQ9H3P2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NELFAQ9H3P2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.11■□□□□ 0.49
NELFAQ9H3P2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NELFAQ9H3P2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 FP700111.2-201ENST00000619190 1892 ntBASIC18.1■□□□□ 0.49
NELFAQ9H3P2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.1■□□□□ 0.49
NELFAQ9H3P2 AC006970.2-201ENST00000450065 779 ntBASIC18.1■□□□□ 0.49
NELFAQ9H3P2 CDV3P1-201ENST00000471403 739 ntBASIC18.1■□□□□ 0.49
NELFAQ9H3P2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NELFAQ9H3P2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 AC027702.1-201ENST00000563810 1770 ntBASIC18.09■□□□□ 0.49
NELFAQ9H3P2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 FAM21FP-204ENST00000608637 956 ntBASIC18.09■□□□□ 0.49
NELFAQ9H3P2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NELFAQ9H3P2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NELFAQ9H3P2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.08■□□□□ 0.49
NELFAQ9H3P2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
NELFAQ9H3P2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NELFAQ9H3P2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NELFAQ9H3P2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
NELFAQ9H3P2 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.08■□□□□ 0.48
NELFAQ9H3P2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms