Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.64■□□□□ 0.89
PHACTR1Q9C0D0 AC027612.3-201ENST00000413684 1047 ntBASIC20.64■□□□□ 0.89
PHACTR1Q9C0D0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PHACTR1Q9C0D0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.64■□□□□ 0.89
PHACTR1Q9C0D0 KRT18P20-201ENST00000548986 1279 ntBASIC20.64■□□□□ 0.89
PHACTR1Q9C0D0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.64■□□□□ 0.89
PHACTR1Q9C0D0 CCDC92B-201ENST00000575506 885 ntBASIC20.64■□□□□ 0.89
PHACTR1Q9C0D0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHACTR1Q9C0D0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHACTR1Q9C0D0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.64■□□□□ 0.89
PHACTR1Q9C0D0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHACTR1Q9C0D0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHACTR1Q9C0D0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.64■□□□□ 0.89
PHACTR1Q9C0D0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHACTR1Q9C0D0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PHACTR1Q9C0D0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHACTR1Q9C0D0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHACTR1Q9C0D0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
PHACTR1Q9C0D0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.63■□□□□ 0.89
PHACTR1Q9C0D0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
PHACTR1Q9C0D0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHACTR1Q9C0D0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.63■□□□□ 0.89
PHACTR1Q9C0D0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PHACTR1Q9C0D0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHACTR1Q9C0D0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHACTR1Q9C0D0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.63■□□□□ 0.89
PHACTR1Q9C0D0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.63■□□□□ 0.89
PHACTR1Q9C0D0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.63■□□□□ 0.89
PHACTR1Q9C0D0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHACTR1Q9C0D0 TMEM179-206ENST00000616017 1645 ntBASIC20.63■□□□□ 0.89
PHACTR1Q9C0D0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHACTR1Q9C0D0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHACTR1Q9C0D0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHACTR1Q9C0D0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHACTR1Q9C0D0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHACTR1Q9C0D0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PHACTR1Q9C0D0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.62■□□□□ 0.89
PHACTR1Q9C0D0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHACTR1Q9C0D0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.62■□□□□ 0.89
PHACTR1Q9C0D0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.62■□□□□ 0.89
PHACTR1Q9C0D0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHACTR1Q9C0D0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PHACTR1Q9C0D0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHACTR1Q9C0D0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PHACTR1Q9C0D0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 AC125437.2-201ENST00000625180 2167 ntBASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 BX323043.1-201ENST00000641006 1765 ntBASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PHACTR1Q9C0D0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 AC091799.1-201ENST00000422823 811 ntBASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 SLC7A5P1-201ENST00000568957 537 ntBASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PHACTR1Q9C0D0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms