Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 AC012414.1-201ENST00000556676 535 ntBASIC17.44■□□□□ 0.38
NICN1Q9BSH3 AC106739.1-201ENST00000617035 715 ntBASIC17.44■□□□□ 0.38
NICN1Q9BSH3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NICN1Q9BSH3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NICN1Q9BSH3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NICN1Q9BSH3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NICN1Q9BSH3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
NICN1Q9BSH3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NICN1Q9BSH3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.43■□□□□ 0.38
NICN1Q9BSH3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.43■□□□□ 0.38
NICN1Q9BSH3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.43■□□□□ 0.38
NICN1Q9BSH3 AF213884.3-201ENST00000563833 479 ntBASIC17.43■□□□□ 0.38
NICN1Q9BSH3 TPRG1LP1-201ENST00000598702 760 ntBASIC17.43■□□□□ 0.38
NICN1Q9BSH3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NICN1Q9BSH3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NICN1Q9BSH3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NICN1Q9BSH3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.43■□□□□ 0.38
NICN1Q9BSH3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NICN1Q9BSH3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NICN1Q9BSH3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NICN1Q9BSH3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NICN1Q9BSH3 RASA4CP-201ENST00000424092 1398 ntBASIC17.42■□□□□ 0.38
NICN1Q9BSH3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NICN1Q9BSH3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NICN1Q9BSH3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NICN1Q9BSH3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NICN1Q9BSH3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.42■□□□□ 0.38
NICN1Q9BSH3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NICN1Q9BSH3 EDA-201ENST00000338901 1233 ntBASIC17.42■□□□□ 0.38
NICN1Q9BSH3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.42■□□□□ 0.38
NICN1Q9BSH3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.42■□□□□ 0.38
NICN1Q9BSH3 RARRES2P11-201ENST00000635158 484 ntBASIC17.42■□□□□ 0.38
NICN1Q9BSH3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NICN1Q9BSH3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NICN1Q9BSH3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NICN1Q9BSH3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.41■□□□□ 0.38
NICN1Q9BSH3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NICN1Q9BSH3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NICN1Q9BSH3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.41■□□□□ 0.38
NICN1Q9BSH3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.41■□□□□ 0.38
NICN1Q9BSH3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NICN1Q9BSH3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NICN1Q9BSH3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NICN1Q9BSH3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.41■□□□□ 0.38
NICN1Q9BSH3 MIR939-201ENST00000401314 82 ntBASIC17.41■□□□□ 0.38
NICN1Q9BSH3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.41■□□□□ 0.38
NICN1Q9BSH3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
NICN1Q9BSH3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NICN1Q9BSH3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NICN1Q9BSH3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NICN1Q9BSH3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
NICN1Q9BSH3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NICN1Q9BSH3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NICN1Q9BSH3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NICN1Q9BSH3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NICN1Q9BSH3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 AC008175.2-201ENST00000612840 297 ntBASIC17.4■□□□□ 0.38
NICN1Q9BSH3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 SMG8-203ENST00000578922 2178 ntBASIC17.4■□□□□ 0.38
NICN1Q9BSH3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NICN1Q9BSH3 AC008406.3-201ENST00000620001 1374 ntBASIC17.4■□□□□ 0.38
NICN1Q9BSH3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
NICN1Q9BSH3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NICN1Q9BSH3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
NICN1Q9BSH3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NICN1Q9BSH3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NICN1Q9BSH3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NICN1Q9BSH3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms